Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01431 ATGACGAGCGCTTCGGAATTATTCCACATCAGGAGGCACCGATTGGGACGAAATGATCTCGATTCAGCTTTCCACTCTTCCCCCACTCCAGATTTCCATCACCACCGCCTTCACGACTCCGACGACGACGATTCTCTCCGCACCCGCCGCCACTACAACGTCCGCCGCATCCGTCACCCGGAGCGTACATTTGATAGATTTGATGGAAGGTATCGTCGGTCTCTAGTAAATGATAGCGTTGATTCGGGAGAAAACGTGAGAGCTACTCCAAGAGCGAGTGCCAGTGACAGATTACCTGTAGGTGTGGTACTTGCGCGTGAAAGACTCCTACAGAGGTTGAGAGGAGAGCCTGTTGATAGAAACAGGCAACATGATAGAGATTCAACGGACGAGGATCAAGAAAGTGAGTTATCAAGTGACGTTCCAACCGTTGACTCTTTAGTTACTGATTTGACTTCTCAAATGGCAAGGTCTCTGCTCTTGCAAGAACCATCCAAAAAGCCACCCGGACTCACTCAGGAGGCCCTGGACTGTTTGCACCTTGAAGTTTTTAGAAGCAGCGATATGAAATCAGAATCCAGGATACTGCAGGATTGTGGGATATGCTTGGAATCTTTCAGGGATGGAGATGAACTGATCCATTTGCAATGTGGACATAAATTTCACTCTGCTTGTTTGGATCCTTGGATTCGCAGTTGTGGAGACTGTCCGTACTGTCGAAGATGTATAGTTGTAAATTGTCACCTTCCAAAGAATGAAGCTGCTTAG 768 0.4779 MTSASELFHIRRHRLGRNDLDSAFHSSPTPDFHHHRLHDSDDDDSLRTRRHYNVRRIRHPERTFDRFDGRYRRSLVNDSVDSGENVRATPRASASDRLPVGVVLARERLLQRLRGEPVDRNRQHDRDSTDEDQESELSSDVPTVDSLVTDLTSQMARSLLLQEPSKKPPGLTQEALDCLHLEVFRSSDMKSESRILQDCGICLESFRDGDELIHLQCGHKFHSACLDPWIRSCGDCPYCRRCIVVNCHLPKNEAA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01431 255 SMART ring_2 199 239 IPR001841 -
Car04g01431 255 CDD RING-H2_PA-TM-RING 198 240 - -
Car04g01431 255 PANTHER SI:CH211-59O9.10 1 245 - -
Car04g01431 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 244 IPR013083 -
Car04g01431 255 MobiDBLite consensus disorder prediction 114 131 - -
Car04g01431 255 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED 1 245 - -
Car04g01431 255 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Car04g01431 255 Pfam Ring finger domain 198 240 IPR001841 -
Car04g01431 255 MobiDBLite consensus disorder prediction 28 45 - -
Car04g01431 255 SUPERFAMILY RING/U-box 198 246 - -
Car04g01431 255 MobiDBLite consensus disorder prediction 20 45 - -
Car04g01431 255 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01431 Car-Chr4 14573494 14576383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01431 1 244 C3H Transcription Factor Family AT1G49850 42.636 1.29e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01431 - - gmx:548042 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01431 04 14573494 14576383 Car04g01431 04 14573494 14576383 ECH