Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01430 ATGAGTGACGCGGTCAATGAAGAGGATCGCAGGGGTGGTGCACCTGTTGCTTCTCCTAAGAGGGACGTAGCTTTCTTTGAAGGGGACAGAGACTTTGAGCCACCCAATggtattgaatttgaatctcatgaagcagcatattcattttatcaagaatatgccaaatctatgggattcaccaCTTCAATTAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCGAAATTTGCGTGCTCTAGGTATGGAGTTACACCTGAGTCTGATAGTGGGAGCAGTCGGAGACCAAGTGTAAAGAAGACAGATTGCAAAGCTTGCATGCATGTGAAGAAAAGGCCGGATGGAAAGTGGACCATTCATGAATTTATAAAAGATCACAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTTAAGTTAGCTGAAAAGAATAATATTGATATCTTGCATGCCGTTAGTGAACGCACCAAAAAGATGTATGTTGAAATGTCTAGACAATCTGGTGGCTGTCAAAACCCCGAGTCTCTCGTGGGTGATACAAACTATCAGTTTGACAGAGGCCAATATCTGTCTTTGGATGagggagatgcccaagttatgctggagtatttcaagcatattcaaaaggaaaatcccaacttcttctattctatagatttaaatgaagaacaacgactaagaaatctattttgggtcgatgcaaaaagtatcaatgattatctcagctttaatgatgtagtttcatttgatactacctacgtaaaaagcaatgataagttgccttttgctccttttattggagtgaaccatcactctcaacctatattgcttggatgtgcattggttgcagatgagactaagccaacttttgtttggttactgaagacgtggcttagagcgatgggagggcaagctcccaaagttatagtcactgatcaagacaaagccttgaaggcggcaattgaagaagtcttcccaaatgtacgccattgcttttctctttggcacatattggaaaagatacctgaaaatttgtctttcgtgataaaacagtataagaacttcttgccaaagtttaacaattgcatttttaagtcttggacagatgaacagtttgacatgagatggtgggaaatggtgactatatttgaactccatgatgatgtttggtttcattcattgtatgaagaccggaaaaagtgggtaccaacatacatgggggatgtctttttagctggaatgtccacatctcaacgttcagaaagtatgaactctttctttgacaaatacattcataagaaaatcacccttaaagagtttgtgaaacaatatgggctaattcttcagaataggtatgatgaagaagccattgcagattttgatacattgcacaaacagcctgctcttaaatctccttcaccttgggaaaaacaaatgtcaacaatttatacacatacaatatttaagaaattccaaattgaagtgttgggtgttgccggctgtcaatctaggatagaggttggagatggaaatgttgcaaaatttatagttcaagattacgagaaggatgaagagtttttggtaacttggaatgagttgagctcagaggtctcttgcttctgtcgattgtttgaatataaaggttttctttgcaggcatgcattgagtgttctccaacgttgtggttgttcaagtgttccatctcattatatcatgaagaggtggaccaaagatgccaaAATTAGGGAACACATAGCAGATAGGACAAGAAGGATTCAAACCAGGGTTCAACGTTATAATGATCTGTGCAAACGGGCTATTGAGTTGAGTGAAGAAGGATCATTATCTGAAGAGAGTTACAATGTTGCTATCCGCACACTCATTGATTCCCTAAAGAACTGTGTACTTGTAAATAACTCTAACGGCAATGGTGCAGAAACTGGAAACAATGGTTACAGTCTTCGTGAAGCAGAACAAAACCAGGTTACCCTTGCATCGAAGCCAAGTAAGAAGAGGAACACAACTAGGAAAAGAAAGGTGCAACAAGAGCAGAATCCTATACTTGTTGATGCTCAAGATAGCCTGCAGCAAATGGATAATCTTAGCTCAGATGCAATGACCCTTAATGGATATTATGGTACCCAGCAGAATGTGCAAGGACTGCAGGTACAGTTGAACCTAATGGAACCACCTCATGATGGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGCTCCGAGTCATGATGGGTATTTCGGAACACAACAAAGCATTCATGGGATGGGAGGGCAATTGGAATATCGTCCGACAACCCCTTTTGGATATAGTCTTCAGGATGAGCCTGATCAACACTTTCACAGCAACAATTCAAGAAATACATAG 2430 0.2074 MSDAVNEEDRRGGAPVASPKRDVAFFEGDRDFEPPNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKKRPDGKWTIHEFIKDHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGCQNPESLVGDTNYQFDRGQYLSLDEGDAQVMLEYFKHIQKENPNFFYSIDLNEEQRLRNLFWVDAKSINDYLSFNDVVSFDTTYVKSNDKLPFAPFIGVNHHSQPILLGCALVADETKPTFVWLLKTWLRAMGGQAPKVIVTDQDKALKAAIEEVFPNVRHCFSLWHILEKIPENLSFVIKQYKNFLPKFNNCIFKSWTDEQFDMRWWEMVTIFELHDDVWFHSLYEDRKKWVPTYMGDVFLAGMSTSQRSESMNSFFDKYIHKKITLKEFVKQYGLILQNRYDEEAIADFDTLHKQPALKSPSPWEKQMSTIYTHTIFKKFQIEVLGVAGCQSRIEVGDGNVAKFIVQDYEKDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKIREHIADRTRRIQTRVQRYNDLCKRAIELSEEGSLSEESYNVAIRTLIDSLKNCVLVNNSNGNGAETGNNGYSLREAEQNQVTLASKPSKKRNTTRKRKVQQEQNPILVDAQDSLQQMDNLSSDAMTLNGYYGTQQNVQGLQVQLNLMEPPHDGYYVNQQSMQGLGPLNSMAPSHDGYFGTQQSIHGMGGQLEYRPTTPFGYSLQDEPDQHFHSNNSRNT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01430 809 MobiDBLite consensus disorder prediction 788 809 - -
Car04g01430 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 10 724 - -
Car04g01430 809 MobiDBLite consensus disorder prediction 670 695 - -
Car04g01430 809 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Car04g01430 809 MobiDBLite consensus disorder prediction 1 16 - -
Car04g01430 809 MobiDBLite consensus disorder prediction 1 22 - -
Car04g01430 809 Pfam MULE transposase domain 255 348 IPR018289 -
Car04g01430 809 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
Car04g01430 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Car04g01430 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 724 IPR031052 GO:0006355
Car04g01430 809 SMART 26again6 546 573 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01430 Car-Chr4 14562725 14567684 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car04g01430 MULE 2.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01430 - - gmx:100814153 1474.91