Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01376 ATGAATTCGACCATGTCTTCTTCTAATTCCTTCAAGCTTCTATTTCTGTTCATCCTCATTAACTTTCTCCTTAACAAAACAACTAAAGCACAAGACCCCACTTTTATCTACCACAGTTGTTCTAAAGACAAAACCACCACCAACAGCACATACCAAACAAACCTCGTAACCATGTTCTCTTCACTATCCTCCAACGCCACCAACAATGAATTCCAGAACACCACAGTCACAGCAACAAACCCATCAAACAGAGTGTACGGTCTATTCATGTGCAGGGGAGACGTTTCATCTCCTTTCTGCAAACAATGCGTGTCGAATGCAACACAGAAACTATCATCAGACTCAGACTGTTCCTTATCAAAAGTGGCAGTTATCTGGTACGACGAGTGCATGGTTCGGTATTCCAACACCTCTTTTTTCTCAACCGTAGACACGAGTCCCAGTGTTTACCTTTGGAACACTGCCAATATGACGAACCAAGAAAGCTTCATGAGTTTGCTGTCTGTTACTATGAATGAAACAGCAAATGAAGCGGCGAATTCTAATTCTGTTGGTGTTAAAAAGAAGTATGCTACAAAGGAGGCTAGCGTATCTGGATTTCAGACGCTATATTGTTTGGCTCAGTGTACAGAAGATTTATCTCCACAAGATTGTAGAATATGCCTTAGTGATGCCATAGGAGATCTTCCACAGTGCTGTGAAGGAAAGCAAGGAGGAAGAGTTTTATTTCCTAGCTGTAATGTTAGATATGAATTGCATCCTTTTTATCAGAAGATTCAGAAACTTGCTCCTTCACCGGCACCAACACCAGGACTTGCTCCTCCAACAACCACTCCGAATTTGGGAGTTTGGAATATTGCAGGAAGTAGTGGAATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCAATTACGGTAGCTGTGTTGCTATTTATAGTAGGCGTTTGTTTCTTCTGTAAAAGAGCAGCAAAGAAGAAGCGTGACGTTGCACAAGAACCAAGAACTGAAACTGATATTACCATCGTGGAATCGTTGAGATTTGATTTGGCTACACTAGAAAAAGCCACAAACAACTTCTCAGAAGCAAATAAGCTAGGTCAAGGTGGATTTGGTCAGGTTTACAAGGGCATGCTTTCAAGTGGACAAGAAATAGCTGTCAAGAGACTCTCTAAAAACTCTGGCCAAGGCGGAGAAGAATTTAAGAATGAAGTTATGCTGGTTGCCCAACTTCAGCATAGAAATTTAGCTAGGCTTCTAGGTTTTTGCTTAGAAAGAGAAGAAAAGATACTTGTTTATGAATTTGTGGCCAACAAAAGCCTTGACTATATTCTTTTTGATCCTGAAAAACAAAGCGGGTTGGATTGGACAAGGCGTTACAAGATTATTCGAGGGATTGCTCGAGGCATTCAATATCTTCACGAAGATTCTAGGCTGAAAATTATTCATCGTGATCTCAAAGTTAGCAACATATTGTTGGATGGAAACATGAATCCAAAAATCTCTGACTTTGGCATGGCAAAATTATTTGGAATGGATCAAACTCAAGGAAATACTAGTAGGATGGTAGGGACATATGGTTACATGTCTCCGGAATATGCAATGCGTGGAGAGTTCTCTATCAAGTCTGATATATACAGTTTTGGAGTCCTCATTATGGAGATTATAAGCGGCAAGAAGAACATATCTTTCCATGAAACAGGTGTTGCTGAGGATTTAATGAGCTATGTGAGTAGAGAAAAGTTTAATTTTGTGCTTCTTATTATATTGTGA 1770 0.4 MNSTMSSSNSFKLLFLFILINFLLNKTTKAQDPTFIYHSCSKDKTTTNSTYQTNLVTMFSSLSSNATNNEFQNTTVTATNPSNRVYGLFMCRGDVSSPFCKQCVSNATQKLSSDSDCSLSKVAVIWYDECMVRYSNTSFFSTVDTSPSVYLWNTANMTNQESFMSLLSVTMNETANEAANSNSVGVKKKYATKEASVSGFQTLYCLAQCTEDLSPQDCRICLSDAIGDLPQCCEGKQGGRVLFPSCNVRYELHPFYQKIQKLAPSPAPTPGLAPPTTTPNLGVWNIAGSSGISSGTIVAIVVPITVAVLLFIVGVCFFCKRAAKKKRDVAQEPRTETDITIVESLRFDLATLEKATNNFSEANKLGQGGFGQVYKGMLSSGQEIAVKRLSKNSGQGGEEFKNEVMLVAQLQHRNLARLLGFCLEREEKILVYEFVANKSLDYILFDPEKQSGLDWTRRYKIIRGIARGIQYLHEDSRLKIIHRDLKVSNILLDGNMNPKISDFGMAKLFGMDQTQGNTSRMVGTYGYMSPEYAMRGEFSIKSDIYSFGVLIMEIISGKKNISFHETGVAEDLMSYVSREKFNFVLLIIL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01376 589 Pfam Salt stress response/antifungal 156 251 IPR002902 -
Car04g01376 589 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Car04g01376 589 SUPERFAMILY Protein kinase-like (PK-like) 341 564 IPR011009 -
Car04g01376 589 Pfam Protein kinase domain 360 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01376 589 Gene3D Phosphorylase Kinase; domain 1 319 434 - -
Car04g01376 589 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 576 - -
Car04g01376 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Car04g01376 589 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Car04g01376 589 Gene3D Transferase(Phosphotransferase) domain 1 435 584 - -
Car04g01376 589 ProSiteProfiles Protein kinase domain profile. 359 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01376 589 SMART serkin_6 359 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01376 589 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Car04g01376 589 ProSiteProfiles Gnk2-homologous domain profile. 145 255 IPR002902 -
Car04g01376 589 Gene3D - 32 139 IPR038408 -
Car04g01376 589 Gene3D - 145 255 IPR038408 -
Car04g01376 589 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01376 Car-Chr4 14009721 14014324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01376 1 576 Receptor kinase-like Gene Family AT4G05200 52.668 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car04g01376 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01376 - - gmx:100789354 756.133