Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01375 ATGGGTTCCTTCCATTTTCTGTTTTCACTCTCAACTTTATTTTGCCTCTTTAGTCATTGTTCTCCTTCTCCCATCATACAAGCTGCTACTGATAATGTTACACATGCTTACTATAACTGCACAAGGAACACTACTGCTACCAATAATGCTTACCGTTCCAACATCCAAACACTCTTAAAATGGATCTCTTCCAATAGCACTAACAATGCAAGATACTACAACACCACAGTTAATAGCCAAAACACTGCAGACACTGTCTATGGTTTCTTCCTTTGCATTAGAGACACTGATCCCAAAATCTGTCAGTCGTGTGTGATAGAAGCAGCCAAACTCATATCATCATTGTGCACCACATCAATAGAAGCCATAGTTTGGTACACAGTATGCTATGTACGGTATTCTGACCGTTGCTTCTTTTCCACCGTGGAGAAAAGTCCAGAAATTTCTTTCATGAATGATAAGGATTATGTGGGTGAGGTTGAGCGCTTCAACAACATTGTCTGGGATATGTTGAACGATTTGAGAAGTGAGGCAGCAAATGCTTCTTCTAAATTGGCTGACAAGTCAGTGAACATCACAGCACACCAGAAACTATATGGCTACGCTTGGTGCACCCCATACCTATCAGCAGAAAATTGCAGCTGGTGTCTTAGTGATGCCATAGCAGAAGTTCCAACCAGTTGCTGCCGAGGAAAATCTGGAGGCTCAATAATATATCCTAGTTGTGGTGTTAGATTCGAATTATATCCATTCCACAAGGCACACAGCAATAATGCTTGGGTACGACCACCCCCACTGCCAACAAGTCCTCTTCCTTCAGCTCCTCCAGGAAAAGAAAAACAGAAGACACTAATATCAATTGTGATCGTTGTTCCAGTTGTTGTATCACTGGTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCTATATAGAAAGGAAAGAAAGAATCAACATGATATCCTCAAAGAAAGCTTTGGGAATGACATTACCTCTTTGGAGTCCTTGCAATTTGAATTAGCCACAATTGAAGCTGCAACAAACAGATTTGGTGTAGAAAACAGGATAGGGAAAGGTGGATTTGGAGAAGTCTACAAAGGAATTCTTCCTGATGGACAAGAAATAGCTGTGAAGAGACTGTCCAAAAGTTCTGGACAAGGAGCAGAGGAATTTAAAAATGAAGTGATGTTGATAGCCAAACTTCAACATAGAAATTTGGTGAGGTTAATAGGATTTTGCCTTGAAGACCAAGAAAAGATACTTATCTATGAATATGTGCCTAACAAGAGTCTTGATCACTTCCTATTTGATCCTCAGAAGCAAAAACAATTAACTTGGTCTGAGCGGTATAATATCATCAAAGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGACTCCCGTCTCAAGATTATACATCGTGATATTAAACCAAGCAATGTTCTTTTAGATAACAACATGATTCCTAAGATATCTGATTTTGGCATGGCAAGGATGGTAGCTATTGAGCAAATTCAAGGACAAACAAATAGAGTTGTGGGCACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACATTTTTCAGTGAAGTCAGATGTTTTTAGTTTTGGAGTTATGCTTCTCGAGATTATTAGTGGAAAAAAGAATTCTTATACTTTTGAATCATGCCGCATAGATGATCTATTAAGCAATGCTTGGAACCAATGGAAAGGTGAGTCACCATTTCAGTTGCTGGATCCAATTATGCAAGAATCTTATACTCCAAATGAAGTAGAAAAGTGTGTGCAAATTGGTTTATTGTGTGTCCAAGAAAGTCCAGATGATAGGCCTACAATGGGAACAGTTGTTTCATATCTTAATAATCTTTCAATTGAAATGCCATTTCCTCTGGAACCAGCATTTTTCATGCATGGCAGAACGAGAAGACATTCTCATGAACATGAATCATATTCAGAATCTACTCTAAATAAATTTTGGAAAGAATTGGTGGGGGTGGAATGCACTGCAATAGGTTCATCTAACACGAAGTATCTCCAAAATACCTAA 2046 0.3876 MGSFHFLFSLSTLFCLFSHCSPSPIIQAATDNVTHAYYNCTRNTTATNNAYRSNIQTLLKWISSNSTNNARYYNTTVNSQNTADTVYGFFLCIRDTDPKICQSCVIEAAKLISSLCTTSIEAIVWYTVCYVRYSDRCFFSTVEKSPEISFMNDKDYVGEVERFNNIVWDMLNDLRSEAANASSKLADKSVNITAHQKLYGYAWCTPYLSAENCSWCLSDAIAEVPTSCCRGKSGGSIIYPSCGVRFELYPFHKAHSNNAWVRPPPLPTSPLPSAPPGKEKQKTLISIVIVVPVVVSLVLSVLGCCCFLYRKERKNQHDILKESFGNDITSLESLQFELATIEAATNRFGVENRIGKGGFGEVYKGILPDGQEIAVKRLSKSSGQGAEEFKNEVMLIAKLQHRNLVRLIGFCLEDQEKILIYEYVPNKSLDHFLFDPQKQKQLTWSERYNIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNNMIPKISDFGMARMVAIEQIQGQTNRVVGTYGYMSPEYAMHGHFSVKSDVFSFGVMLLEIISGKKNSYTFESCRIDDLLSNAWNQWKGESPFQLLDPIMQESYTPNEVEKCVQIGLLCVQESPDDRPTMGTVVSYLNNLSIEMPFPLEPAFFMHGRTRRHSHEHESYSESTLNKFWKELVGVECTAIGSSNTKYLQNT 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01375 681 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 645 - -
Car04g01375 681 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Car04g01375 681 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Car04g01375 681 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 645 - -
Car04g01375 681 SUPERFAMILY Protein kinase-like (PK-like) 334 649 IPR011009 -
Car04g01375 681 Gene3D - 147 251 IPR038408 -
Car04g01375 681 Gene3D - 32 138 IPR038408 -
Car04g01375 681 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Car04g01375 681 ProSiteProfiles Protein kinase domain profile. 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01375 681 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Car04g01375 681 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Car04g01375 681 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01375 681 CDD STKc_IRAK 354 622 - -
Car04g01375 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Car04g01375 681 Pfam Protein tyrosine and serine/threonine kinase 351 618 IPR001245 GO:0004672|GO:0006468
Car04g01375 681 Coils Coil 171 191 - -
Car04g01375 681 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Car04g01375 681 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01375 Car-Chr4 13994404 14008867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01375 25 649 Receptor kinase-like Gene Family AT4G05200 44.984 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car04g01375 PK_Tyr_Ser-Thr 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01375 - - gmx:100793219 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01375 04 13994404 14008867 Car04g01375 04 13994404 14008867 ECH