Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01374 ATGAGTTCCTTCCAATTGTTGTTTTTActtccatctttctttttccactttgttcattgctctccttctcccatcttAGAAGCTACTATTGATAATGTTACGAATGCTTACTATAACTGCACAAGGAACACCACTTCTGCTACCAATAATGCTTACCATTCCAACATCAAAACACTCCTAGAATGGCTTTCCTCAAATAGCAGTAACAGCCTCAGATACTACAACACCACAGTTGCTAGCCAAAACTCTGCAGACACTGTCTATGGTTCTTTCCTTTGTGTTAGAGACATTGACCCCAGACTATGCCAGTTGAGCGTGATAGAAGCAGCCAAACTCATATCATCACTGTGCACCACAGCAGCAGAAGCCATAGTTTGGTACTCAGTATGCTATGTGCGCTATTCTGATCGTCGCTTCTTTTCCACCGTGGAGAAAAGTCCAGAACTTTCTTTCATGAATGATAAGAATTATGTGGGTCAAGTTGAGCGCTTCAACAACATTCTTTGGGACATGTTGAACAATTTGAGAATTGAGACAGCAAATGCTTCTACTAAATTTGCTGAGAAGTCAGTGAACCTCACAGACAACCAAAAATTATATGGCTTCACTTGGTGTGTCCCATACCTATCCAAAGAAAACTGTGGTTGGTGTCTTACCAGTGCTATAGCAGAAGTTCCAACCACTTGCTGCAGAGGAAAATCTGGAGGCTCAATATATTATCCCAGTTGTGGTGTTAGATTTGAATTATATCCATTCCACAAGGAACTCGGCAATATTCCTTGGGTGCCACCGGCTACAAGTCCTTACCTTTCAGCTTTACCAGGAAAAGGAAAACAGAAGACATTAACATTAATTGTGATCGTAGTTCCAATTGTTGTTTCACTGGTGGTTCTAGCCTTGGGATACCGTTGCTTTCTATATAGAAAAGAAAGAAAGAATCAGCATGACATTCTCAAAGAAAGCTTTGGGAATGACATTGCCACTTTTGAGTCCTTGCAATTTGAATTAGCCAAAATTTATGCTGCAACAAACAGATTTGCTGCAGAAAACAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACAAGGGAATTCTTTCGGATGGACAAGAAATTGCTGTGAAGAGGCTTACAAGAAGTTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACACAGGAATCTAGTGAGATTACTAGGATTTTGTTTGGAAGATGAAGAGAAGATACTTATCTATGAGTATGTACCAAACAAGAGTCTTGATTACTTTTTATTTGATCCCCAGAAGAGAAAACTGTTATCTTGGTCTCAACGTCAGAAAATCATCAAAGGAATTGTCCGTGGAATTCTTTATCTACATGAAGATTCTCGCCTCAAAATAATACATCGTGATCTAAAACCTAGCAATGTCTTGTTAGATAGTAATATGAATCCGAAAATATCAGATTTTGGCATGGCTAGAATCATGTATACAGATCAAATTGAAGAAAGTACAGGCAGGATTGTAGGGACATATGGTTATATATCTCCAGAATATGCAATGCACGGATACTTTTCTGTGAAATCCGATGTGTTTAGTTTCGGAATTATGGTTCTAGAGATTATTAGTGGAAAGAGGAAAGGTTGTTCTGCTGAATCAGAGTGCGTTGATGACATCCGAAGATATGTGAGTACAAAATTTCTTAGACTTCTCTTTATAGAGTTGAAAGAATGA 1734 0.376 MSSFQLLFLLPSFFFHFVHCSPSPILEATIDNVTNAYYNCTRNTTSATNNAYHSNIKTLLEWLSSNSSNSLRYYNTTVASQNSADTVYGSFLCVRDIDPRLCQLSVIEAAKLISSLCTTAAEAIVWYSVCYVRYSDRRFFSTVEKSPELSFMNDKNYVGQVERFNNILWDMLNNLRIETANASTKFAEKSVNLTDNQKLYGFTWCVPYLSKENCGWCLTSAIAEVPTTCCRGKSGGSIYYPSCGVRFELYPFHKELGNIPWVPPATSPYLSALPGKGKQKTLTLIVIVVPIVVSLVVLALGYRCFLYRKERKNQHDILKESFGNDIATFESLQFELAKIYAATNRFAAENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDEEKILIYEYVPNKSLDYFLFDPQKRKLLSWSQRQKIIKGIVRGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIMYTDQIEESTGRIVGTYGYISPEYAMHGYFSVKSDVFSFGIMVLEIISGKRKGCSAESECVDDIRRYVSTKFLRLLFIELKE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01374 577 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Car04g01374 577 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Car04g01374 577 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 569 - -
Car04g01374 577 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Car04g01374 577 CDD STKc_IRAK 352 546 - -
Car04g01374 577 Gene3D Transferase(Phosphotransferase) domain 1 422 571 - -
Car04g01374 577 SUPERFAMILY Protein kinase-like (PK-like) 332 547 IPR011009 -
Car04g01374 577 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Car04g01374 577 Gene3D - 148 252 IPR038408 -
Car04g01374 577 Gene3D - 32 139 IPR038408 -
Car04g01374 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Car04g01374 577 SMART serkin_6 346 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01374 577 ProSiteProfiles Protein kinase domain profile. 346 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01374 577 Pfam Protein kinase domain 348 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01374 577 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 569 - -
Car04g01374 577 Pfam Salt stress response/antifungal 155 250 IPR002902 -
Car04g01374 577 Pfam Salt stress response/antifungal 40 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01374 Car-Chr4 13987781 13992129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01374 25 563 Receptor kinase-like Gene Family AT4G05200 46.801 1.62e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car04g01374 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01374 - - mtr:MTR_1g105585 817.379