Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01356 ATGTGTTACTCGAAATCCAAAGTGCGCCATCCTCAACCACAAAAACAACAATTGACCACTTCCTCAACAAGTGATTCCGAAAGAACAAACGAAAATGAAGATTCTGGAAACGAAGCTCCTCCTTCTACCGAAGACCAAAATCACAACAAGCAACCTAAAAAAAGAGTCTACAAACGCCACACACAGCCACAAATAAGAGAGATGGAAGCCTTCTTTAAGAATAACCCTCACCCTGATGAGAGGCAAAGGAAACAACTGGGTCGTGAGTTAGGGCTTGGACCTATGCAGATCAAGTTTTGGTTCCAAAACAAGCGTACCCAAATGAAGGTTCAAATGGAACGTCAAGAGAAGTATTTTTTGAAAGAGGAGAATGAGAGACTTCGTGCTGAGATTGAAATGTATAAGGAGGCAATAAACAAAGCAACATGTCCAAAATGTGAATGTCATTTTTGTGTTGATGGAATGTCATTTCATGAGTACCACCACCTTAAGATGATTGAGTATGCCCGATTAAAGGCACAGGCTCAAATGATGGCAGGAACAGTGCCTATAGATGTTGGAAATCATGAGGGTTGTTCCTATTCTAACATTGGTCAAATGTCTGCACCCTCGTTTGAAGTTGGAAGTGGCAGTGGTAACTATTCAAATTCAATCATGATAGAAGAAATGCGTGTTGATTCTAACAATCTCATGATTGTGGAACTAGCAGTTGTTGCAATGGAGGAATTGACAACATTGGCTCTTGCTGGATCCCCTTTATGGATTCCTAGTAACTACAAGGAAATTCTTAATGAAGCTGAATACACAAGATTTTTCCCTAATAATGTAATAGGTCCAAAACTCATAGGGTTAAAATCTGAAGCTTCAAGGGAATCAGTCACTGTTCCCATGAATTCTATTAACCTCATTGAGGTTCTTATGGATGTGAATCAATGGTCAACTATGTTTTATGGTATTGTTTCAAACGCAATGACAATTGATGTCCTGTCACCTGGAGTATCAGGAAATTACAATGGAGCCTTACAAGTGATGTCAGCTGATTTTCAAGTTCCTTCACCACTTGTTTCTGCACGTGAAAATCATTTCATTAGGTACTGTAAGCAGTACCAACAAGGAGTATGGGCTGTGGTTGATGTTTCTTTGGATCATTTGTGTCCTAGTAGTAGTAGTACAACCAGAAGAAGCAGAAGACGACCCTCTGGTTGTTTAATTCAAGAATTACAAAATGGTTGCTCAAAGGTTACATGGGTGGAACATGTAGAAGTAGATGAGAGCACAGTAGCGTCAAATCAATCTTATAAGTCTCTAATAACTTCTGGGCTTGCCTTTGGAGCTATACGATGGGTGGCATCATTAGATAGACAATGTGAACGTCTTGCTATTTCAATGACAATCAACATACCACCTGCAGCAGACCATTTTGCTATGAATAGTCTTCAAAGAAGGAAGAGCTTGATGAGGCTGACAGATAGAATGAAAGTGTATTTTTCAACTGTGGCTGGTTCTTCTATACCAAATTGTTGGGAAGTGCTAACGTCTAATTCAAATGATGTAAGGGTGATGATTAAAAGGAGTATCCGTGAACCGGGAACCAATACCGGTTCCGGTCTAATTCTTAGTGCTGGAACTTCTCTCTGGCTTCCGGTTCTTCCAAAGAGGCTTTTCGATTTTCTTCGAAGTCAAAACTCAAGAAGTGAGTGGGATATTATCTCCATCGGAGGTATAATTCAAGAAATGGCACACATACCAAATGGTCAAGATCCTGCCAACTGTGTCTCTTTAATTCGTGTAAAAAGTGCAGATTGCAGTCAAAACAACATGGTTTTACTTCAAGAGAATAGCACTGATAGCACAGGGTCGTATGTAATATATGCTCCTGTAGATTATGGCGCAATGAATGTAGTGATGAATGGTGGTGATCCAGATTGTGTTGTTATGCTTCCTTCGGGTTTTGTGATTCTCCCAGATGGTGTTCCATTGAACAATGGAGGAGGTTGTCTACTAACAATTTCTTTTCAGATATTGATAGATTCAAATCCTAACGCAACTATACAAAATGGCTCAGTGCAATCTGTTATCGGTTTGATTAAGAACACTGTTGAACGGATCAAAATTGCATTGGCTTTTGACAGGACCCCCTAA 2142 0.3982 MCYSKSKVRHPQPQKQQLTTSSTSDSERTNENEDSGNEAPPSTEDQNHNKQPKKRVYKRHTQPQIREMEAFFKNNPHPDERQRKQLGRELGLGPMQIKFWFQNKRTQMKVQMERQEKYFLKEENERLRAEIEMYKEAINKATCPKCECHFCVDGMSFHEYHHLKMIEYARLKAQAQMMAGTVPIDVGNHEGCSYSNIGQMSAPSFEVGSGSGNYSNSIMIEEMRVDSNNLMIVELAVVAMEELTTLALAGSPLWIPSNYKEILNEAEYTRFFPNNVIGPKLIGLKSEASRESVTVPMNSINLIEVLMDVNQWSTMFYGIVSNAMTIDVLSPGVSGNYNGALQVMSADFQVPSPLVSARENHFIRYCKQYQQGVWAVVDVSLDHLCPSSSSTTRRSRRRPSGCLIQELQNGCSKVTWVEHVEVDESTVASNQSYKSLITSGLAFGAIRWVASLDRQCERLAISMTINIPPAADHFAMNSLQRRKSLMRLTDRMKVYFSTVAGSSIPNCWEVLTSNSNDVRVMIKRSIREPGTNTGSGLILSAGTSLWLPVLPKRLFDFLRSQNSRSEWDIISIGGIIQEMAHIPNGQDPANCVSLIRVKSADCSQNNMVLLQENSTDSTGSYVIYAPVDYGAMNVVMNGGDPDCVVMLPSGFVILPDGVPLNNGGGCLLTISFQILIDSNPNATIQNGSVQSVIGLIKNTVERIKIALAFDRTP 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01356 713 Coils Coil 110 140 - -
Car04g01356 713 Gene3D - 269 458 IPR023393 -
Car04g01356 713 CDD homeodomain 54 112 IPR001356 GO:0003677
Car04g01356 713 Gene3D - 41 128 - -
Car04g01356 713 SUPERFAMILY Bet v1-like 505 704 - -
Car04g01356 713 MobiDBLite consensus disorder prediction 1 60 - -
Car04g01356 713 SMART START_1 234 458 IPR002913 GO:0008289
Car04g01356 713 MobiDBLite consensus disorder prediction 9 26 - -
Car04g01356 713 CDD START_ArGLABRA2_like 231 457 - -
Car04g01356 713 Pfam Homeodomain 55 109 IPR001356 GO:0003677
Car04g01356 713 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 34 708 IPR042160 -
Car04g01356 713 SUPERFAMILY Bet v1-like 231 459 - -
Car04g01356 713 SUPERFAMILY Homeodomain-like 41 109 IPR009057 -
Car04g01356 713 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 34 708 - -
Car04g01356 713 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Car04g01356 713 ProSiteProfiles START domain profile. 225 461 IPR002913 GO:0008289
Car04g01356 713 SMART HOX_1 53 115 IPR001356 GO:0003677
Car04g01356 713 Pfam START domain 236 458 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01356 Car-Chr4 13874916 13879685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01356 20 710 Homeobox Transcription Factor Family AT4G21750 54.167 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car04g01356 START 7.2e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01356 K09338 - gmx:100782240 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00049 08 433018 437412 Car04g01356 04 13874916 13879685 PCT