Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01353 ATGCACGACTTTTTCGGCTCCATTCGCCGATCCTTAGTTTTCGCAACTCCACCCTCACACGCCGACGATGGACCCTTCGCCGGAATCGCCAACAAGATTGGCTCCGCCATTCGCAAATCTAGAATCGGCCTCAAACCTCCTTCTCCTCCTCCCATTCGCTGGCGCAAGGGCGAGTTGATTGGTTCCGGTGCCTTCGGTCGCGTCTACATGGGAATGAACCTCGACTCCGGGGAGCTTATTGCCGTCAAACAGGTTTTGATCGAGCCTGGTATTGCTTTCAAGGAGAATACACAGGCTAATATTCGAGAGCTCGAAGAAGAAGTGAAGCTTCTTAAGAATCTTAAGCATCCAAATATAGTTAGATACTTGGGGACGGCTAGAGAGGAAGATTCCTTGAATATTCTGCTGGAGTTTGTACCTGGAGGATCTATCTCGTCACTATTGGGGAAATTTGGATCCTTTCCTGAGTCCGTTATAAGAATGTATACAACACAAATTTTACAGGGGCTTGAATACCTTCACAATAACAGAATTATTCACAGGGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGTATTAAACTCGCAGACTTTGGTGCATCCAGGAAAGTCGTGGAATTGGCTACCATGAATGGAGCAAAGTCTATGAAGGGTACTCCACACTGGATGTCACCTGAAGTTATTTTACAGACAGGATATACAACCTCTGCTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCTCAGGAGGTTTCAGCTCTTTTCTACATTGGGACAACTAGATCTCACCCACCCATACCTGAACATCTCTCTACTGAGGCAAAGGACTTTTTGCTGAAATGCTTTCACAAGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATTACCTGTGAGTATCCAGAATCTCATTCAATATCATGCAGTTCGATCAGGGACTCTTGCAATCAGATGGCAACAAATGGGATGAACTCTAGAAACTTTTTGGTTTCTATCCAAGGATCAACATGCACAGGCCTAAAGGATGTTTGTCAGATGGATAGTTTAAGGTTCTCGACTGTATATCATGCAAATCTTATAAAATCAGACAACTATGATGATGACATGTGTCAGATGGATGATAAAGATGATTTTTTCGTTGCTTCATCAGTAAAATCTAAATCCCTACTTGCTGTTGACGACATTAAGAGTTTCAATCCAATGTGCGAACCTGTGGAGGATGACTGGCCTTGCAAGTTTGATGAAACACTAAATTTGAAGAAAAGCAGACTGAACTTGTCCCCAGATCAAACTATCAAGAAAACTATGAGTCCCGAACCATCTCCTAATGCCGATAATGAGttctcattttcaagtgaacctcttgcagttgaagacgacgatgaagtcacAGAGTCCAAAATTAGAGCTTTCTTGGATGATAAGGCCTTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTAGGCAAATCTAATGCAGCCATTCCTCATGCTCCTGTTGCTGTTGCACAGAGTAAAGTTATTTCAGATGTCTCAAATTTAATATTAAAAAGCAGGTCTCCTAGTCAAGCTAAACGAAGATTTTCAATGGCTAGCATTGCCAATGCAACAAGCCCTGAGAACCACAGAAAATATGTTACTAAGCTTAGTGGTGTGACTGCTCATAGTAGACCTTTGCAGGAAATTCAGCCATCCGAGCTTAATGAATCAAAGGAGACTCTTTATGATGCTGAGCTGGGATCATCTAGTGTTAGCTCAAGCTTCTCTGATAGACAAAGGAAATGGAAAGAAGAACTTGCCGAAGAGCTTGAGCAGACGCGAGAGGTGATGCGTCAAGCAGGATTTGGAGGGAAGTTAACATCACCAAAGGATCACAATTTTCTCAGAGATTGA 1965 0.4163 MHDFFGSIRRSLVFATPPSHADDGPFAGIANKIGSAIRKSRIGLKPPSPPPIRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIEPGIAFKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTTQILQGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASRKVVELATMNGAKSMKGTPHWMSPEVILQTGYTTSADIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTRSHPPIPEHLSTEAKDFLLKCFHKEPNLRPSASDLLLHPFITCEYPESHSISCSSIRDSCNQMATNGMNSRNFLVSIQGSTCTGLKDVCQMDSLRFSTVYHANLIKSDNYDDDMCQMDDKDDFFVASSVKSKSLLAVDDIKSFNPMCEPVEDDWPCKFDETLNLKKSRLNLSPDQTIKKTMSPEPSPNADNEFSFSSEPLAVEDDDEVTESKIRAFLDDKAFELKKLQTPLYEEFLGKSNAAIPHAPVAVAQSKVISDVSNLILKSRSPSQAKRRFSMASIANATSPENHRKYVTKLSGVTAHSRPLQEIQPSELNESKETLYDAELGSSSVSSSFSDRQRKWKEELAEELEQTREVMRQAGFGGKLTSPKDHNFLRD 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01353 654 SUPERFAMILY Protein kinase-like (PK-like) 53 336 IPR011009 -
Car04g01353 654 Pfam Protein kinase domain 55 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01353 654 Coils Coil 94 114 - -
Car04g01353 654 SMART serkin_6 54 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01353 654 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 37 550 - -
Car04g01353 654 Gene3D Transferase(Phosphotransferase) domain 1 53 349 - -
Car04g01353 654 CDD STKc_MAPKKK 53 317 - -
Car04g01353 654 ProSiteProfiles Protein kinase domain profile. 54 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01353 654 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Car04g01353 654 PANTHER MAP KINASE KINASE KINASE 37 550 - -
Car04g01353 654 MobiDBLite consensus disorder prediction 632 654 - -
Car04g01353 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01353 Car-Chr4 13859217 13865036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01353 1 642 MAP Kinase Kinase Kinase AT3G06030 54.354 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car04g01353 Pkinase 8.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01353 - K20606 gmx:100795863 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01353 04 13859217 13865036 Car04g01353 04 13859217 13865036 ECH