Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01324 ATGAATAATGCTGCATGTGTTGAAGCAGAGGACTCTGAGTTTGTGGAAGTTGATCCTACTGGAAGATATGGAAGATACAACGAAATTCTTGGCAAAGGAGCTTCCAAGATAGTGTATAGAGCATTTGATGAGTATGAAGGAATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACTTTAGGCAGAATCCTGAAGACCGTGAGAGATTATATTGTGAAATTCATCTTCTCAAGACATTAAAGCACAAGAACATCATGAAATTCTACACCTCTTGGGTTGATACTTCCAACAGACACATTAACTTTGTCACTGAGATGTTCACATCCGGAACTCTTAGACAGTACAGACTTAAACATAAAAGGGTTAACATCAGAGCTGTTAAGTATTGGTGCAGACAGATTTTGGAAGGTCTTCTCTATCTCCACAGCCATGACCTTCATGTGATTCATAGAGATCTCAAGTGTGATAACATTTTCATTAATGGCAACCAAGGAGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGAAAATCGAATGCTGTTCACTGTGTTGGCACACCAGAGTTTATGGCTCCAGAAATGTATGAAGAGGATTACAATGAATTGGTTGACATATACGCTTTCGGAATGTGCATCTTGGAGATGGTCACCTTTGAATATCCTTATAGTGAATGCAACCATTCTGCTCAAATTTACAAAAAAGTTGTATCTGGGAAGAAGCCAGAATCTCTTTACAAAGTAAATGATCCAGAGGTTAGGCTGTTTGTAGAGAAATGCTTAGCAACTGTATCTCTCAGACTTTCAGCTAAGGAACTCTTAGAAGACCCTTTTCTCCAAATTGAAGATTATGGATCTGACTTGAAAGAAGTGCAGTGTGAAAGAGATTATTGCTATGAAGTAATTCCAACAATTAAACAACCTATGAATGGAAATTATAGCATAAGCAATAGCTTAATGAGAGGTTACAGTGATAATCTTGGTGGTTATGGTTATGGTTCTGTATCTGAATTGGATCATCATCAAGATGTTTTTGAAACGACAGAAATAGATCTCTTTGATTGTGAAGAGGATGATAATTTGGATGAAGTTTACACCTCAATCATAGGCAGGAGAAGAGATGATGGAATCTTTCTGAGAATCAGAATACCAGATAATGAAGGTCGAGTTCGAAACATCTACTTCCCGTTTGACGCGGAGACTGATACTGCATTGAGTGTGGCAAATGAAATGGTAGCTGAGCTTGACATAACTGACCAAGATGTAACAAAATTAGCAAATCTAATAGATAATGAAATTGCAACTTTGGTACCAGGATGGAAAAAGGGACCGAGAATCGATGAAATTTCACAAGATTCAAGAGCAAGTTTCTGCCTCAACTGTGCTGCAAACAATACCTTAGTTAATTATATATCATCAAACAATTCATGTGCCAAGAATCTGCAATTTTTTCATTGTTCTAAAAATGGATGTGCCGCAGTTCACGGCCGATTCGAGGAGATCACATATCAATATGAAGAGCTTGCAAAGAGTGCAACAACAGAAGGTGCACCAAGCCAATCGAACGGCATTCACTATGCCGATATTTGGGGTCAGCGAGAAGAACGAGAGTCAAATCATGAAGTGTTGAAAGATATACATTGTGATACAGCTCACGAGGCATCAAAACTATCGACCATAAAGGAAGAGCAGGAGACAAGTGTTAATGTGAATGACCAAAGTGATCTTAATACTAAAAATTCTCCTTCTAGTCCTGCAGAATCAGAAAGTTTATTCTTGGACTGTGAAAATGAATTAAGGCAAGAATTGAGATGGCTCAAAGCAAGGTACCAAATGCATTTAAGAGAGCTTAGAGATCAACAACTAGGTGGTAGTAGACCAAAATCTATTTGCACATCTCCTGAAACTGAAAAACTAGATCATGGTAAAACTGGTGTTGTGAGGCCACCAGATAAAGTACCTCACATGAAGATACAGCACAATAACTCATTATTGAGGTCTATGGCCTATAAGAAGAAGTTTCCAGTTGATGCTGAGAAATGCACTATTTTAGATAACCATATGATCCCAAATAATTTTTATGAGACGAGTCAGCCTAACAATTCTGAACAAATGGTCACAGCCAAGGACTTCGTTGGAGAAGCTATGCTTCCAAACTTGCTTCAAAGGGCAAGCTCGCTTCCAGTCGATGCAGTTGATATCTAG 2211 0.384 MNNAACVEAEDSEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYEGIEVAWNQVKLYDFRQNPEDRERLYCEIHLLKTLKHKNIMKFYTSWVDTSNRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKYWCRQILEGLLYLHSHDLHVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAVHCVGTPEFMAPEMYEEDYNELVDIYAFGMCILEMVTFEYPYSECNHSAQIYKKVVSGKKPESLYKVNDPEVRLFVEKCLATVSLRLSAKELLEDPFLQIEDYGSDLKEVQCERDYCYEVIPTIKQPMNGNYSISNSLMRGYSDNLGGYGYGSVSELDHHQDVFETTEIDLFDCEEDDNLDEVYTSIIGRRRDDGIFLRIRIPDNEGRVRNIYFPFDAETDTALSVANEMVAELDITDQDVTKLANLIDNEIATLVPGWKKGPRIDEISQDSRASFCLNCAANNTLVNYISSNNSCAKNLQFFHCSKNGCAAVHGRFEEITYQYEELAKSATTEGAPSQSNGIHYADIWGQREERESNHEVLKDIHCDTAHEASKLSTIKEEQETSVNVNDQSDLNTKNSPSSPAESESLFLDCENELRQELRWLKARYQMHLRELRDQQLGGSRPKSICTSPETEKLDHGKTGVVRPPDKVPHMKIQHNNSLLRSMAYKKKFPVDAEKCTILDNHMIPNNFYETSQPNNSEQMVTAKDFVGEAMLPNLLQRASSLPVDAVDI 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01324 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Car04g01324 736 CDD STKc_WNK 22 281 - -
Car04g01324 736 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01324 736 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Car04g01324 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 725 - -
Car04g01324 736 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01324 736 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Car04g01324 736 MobiDBLite consensus disorder prediction 559 591 - -
Car04g01324 736 MobiDBLite consensus disorder prediction 635 650 - -
Car04g01324 736 MobiDBLite consensus disorder prediction 623 650 - -
Car04g01324 736 MobiDBLite consensus disorder prediction 563 591 - -
Car04g01324 736 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01324 736 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Car04g01324 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01324 Car-Chr4 13585290 13589402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01324 1 638 MAP Kinase Kinase Kinase AT3G22420 49.260 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car04g01324 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01324 K08867 - gmx:100804179 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01324 04 13585290 13589402 Car04g01324 04 13585290 13589402 ECH