Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01310 ATGCCAACTCTATTCTCTAAACAACTTCACCTCTGTTTCTTCAAACTCAAATATCTCTCCCAacctcaaccacaacaacaccaccaccaccaccaccaTAAATCTACTCCATCACAATTACCACCTTATAACACTTTCCATTTCAACACCACCTTCACCCACCACAACTCCGTCGTGGAAGACTATTTCTCCGACGACACCACAAACCTCCCACCACCCGActtcgcttccgtcttcgcttcccaacggttcttcttctcttcCCCCGGAAGCTCCAATTCCATCATAGAAACAGAGTCTTCCCCAGACACTACTCCACCATACAACTCGTTGATACCGAAAGGAGGTACCGTGAAAAGGGTACCAAAGTACTCTGTAAACCCCTACGTTGATTTCCTCTGTTCTATGCAGGAAATGATTCAATCTCACCAACCAGTTTTGGATGTTACTAATGATTGGGATTATCTTCATGAGCTTCTTTTATGTTACCTTGCTCTTAATCCTACACATACTCATAAGTATATTGTTCGTGCTTTCACtcatctccttgttgatcttttatcttcttcatcatcctcctccttctcttcttcatcGCCGCAGTCGCCACCTCGCCGGAACCTCATTAGCCAACGCCAAGGTAGTTTCTTAAGGAGGTTGATGTAG 666 0.3514 MPTLFSKQLHLCFFKLKYLSQPQPQQHHHHHHHKSTPSQLPPYNTFHFNTTFTHHNSVVEDYFSDDTTNLPPPDFASVFASQRFFFSSPGSSNSIIETESSPDTTPPYNSLIPKGGTVKRVPKYSVNPYVDFLCSMQEMIQSHQPVLDVTNDWDYLHELLLCYLALNPTHTHKYIVRAFTHLLVDLLSSSSSSSFSSSSPQSPPRRNLISQRQGSFLRRLM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01310 221 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 123 188 IPR006458 -
Car04g01310 221 Pfam Transcriptional repressor, ovate 125 186 IPR006458 -
Car04g01310 221 PANTHER TRANSCRIPTION REPRESSOR OFP12 1 193 - -
Car04g01310 221 ProSiteProfiles OVATE domain profile. 121 185 IPR006458 -
Car04g01310 221 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 193 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01310 Car-Chr4 13490944 13491886 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car04g01310 Ovate 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01310 - - mtr:MTR_1g103640 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01310 04 13490944 13491886 Car04g01310 04 13490944 13491886 ECH