Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01295 ATGCAATCGGAAGCTGGGGGTCTTACGACCCCTAAGATGGGATTGGAAGGAGCTTTGAATTCAAAGATGAAGGGTACTGGAAATCTAAGCAGCAAAGATATGATTTTTAGAGCTGATAAGATTGATCTGAAGAGCTTGGATACTGAGCTAGAAAGGCACTTGAGCAGGGTTTTTTCTAGAAGCGTTGAGGCAAAGAGGCCTAAAGAGGAGTGGGAGATTGATTTGGCCAAATTGGATTTACGATATGTTGTTGCTAATGGGGCTTATGGCACTGTCTACAGGGGAACTTATGACGACCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGAGTTGCCACTGCTGCTGAAACTGCTGCTTTACGAGCATCATTTCGGCAGGAGGTTACTGTGTGGCAAAAACTTGATCATTCAAATGTCACAAAATTTGTTGGAGCTTCAATGGGCACTTCAAATCTTAAAATTCCTTCAGATGCTGGTGGTCAAGATTCACTTCCTTCCAAGGCATGTTGCGTTATTGTTGAGTTTGTTCATGGTGGGACATTGAAACAGTTCTTGTTGAAAAATAGGCGAAAGAAACTTACATACAAGGTTGTGATTCAGTTGGCTTTGGACCTCGCTAGAGGTCTTAGTTATCTACACTCGAAGAAAATTGTTCACCGCGATGTAAAAACTGATAATATGCTTTTAGATGATAATCAAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTCAAAATCCAAGTGAAATGACCGGTGAAACTGGAACAGTTGGATATATGGCACCAGAGGTTATAAATGGCAAACCTTACAACAGAAGTTGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGACATGCCTTACCAAAATCTAAGCTTTGCTGATGCGTCAGCTGCAGTTGCTCATCGGAATCTACGACCAGAGATTCCTAGATGTTGTCCAAGTGCCTTAGCAAATATAATGAAAAGATGTTGGGATAAACATCCCGAAAAGCGTCCAGAAATGCAAGAGGTGGTGGGAATGTTAGAAGCACTTGATACAAGCAAAGGAGGTGGCATGATACCTGAAGATCAGACTCCATTTTGTTTTTGTTTTATAGCTGCTCGGGGTCCATAA 1149 0.4186 MQSEAGGLTTPKMGLEGALNSKMKGTGNLSSKDMIFRADKIDLKSLDTELERHLSRVFSRSVEAKRPKEEWEIDLAKLDLRYVVANGAYGTVYRGTYDDQDVAVKVLDWGEDGVATAAETAALRASFRQEVTVWQKLDHSNVTKFVGASMGTSNLKIPSDAGGQDSLPSKACCVIVEFVHGGTLKQFLLKNRRKKLTYKVVIQLALDLARGLSYLHSKKIVHRDVKTDNMLLDDNQNLKIADFGVARVEAQNPSEMTGETGTVGYMAPEVINGKPYNRSCDVYSFGICLWEIYCCDMPYQNLSFADASAAVAHRNLRPEIPRCCPSALANIMKRCWDKHPEKRPEMQEVVGMLEALDTSKGGGMIPEDQTPFCFCFIAARGP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01295 382 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Car04g01295 382 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 15 375 - -
Car04g01295 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 375 - -
Car04g01295 382 CDD STKc_MAP3K-like 87 353 - -
Car04g01295 382 SUPERFAMILY Protein kinase-like (PK-like) 61 353 IPR011009 -
Car04g01295 382 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01295 382 SMART serkin_6 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01295 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Car04g01295 382 MobiDBLite consensus disorder prediction 1 21 - -
Car04g01295 382 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Car04g01295 382 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Car04g01295 382 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Car04g01295 382 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Car04g01295 382 Gene3D Transferase(Phosphotransferase) domain 1 181 364 - -
Car04g01295 382 Pfam Protein tyrosine and serine/threonine kinase 81 352 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01295 Car-Chr4 13300848 13304286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01295 27 382 MAP Kinase Kinase Kinase AT3G22750 76.751 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car04g01295 PK_Tyr_Ser-Thr 7.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01295 - - gmx:100803917 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01295 04 13300848 13304286 Car04g01295 04 13300848 13304286 ECH
Car04g01295 04 13300848 13304286 Car08g00086 08 696253 700322 PCT