Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01291 ATGGGGAAAAAGGGAAAATGGCTTAGAAACTTCTTAACAGGGAAGAAAGACAGAGACAAAGAAAAGGAAAAATCTATAACCCATCAGAATTTTGCAAATGGAACAGAAAATCCAACTACTCCTATTTCAACAACACCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCATCAGCAACACCAACAGCTTCCAAGGAATTAAATTTTGTGGAAACAAATTCAAATGTTACTGCTTCAGTGACAGTGGAAACTGTCAAGGATATTCAGAATGAACAGAGGAATCATGCCATGgctgttgctgttgctactgcagcagcagctgatgcagcagttgcagctgcagaagctgcagctgctgTGATCCGCTTGACTTCTGGTTCCAATGAAACTTCTAGAAGTGCTGAAGATGCTGCTGCCATTAGAATTCAATGCGTCTTTCGATCTCATTTGGCAAGAAAGGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTGATAAGGGGTCACCTAGTGAGAAAACAAGCTAAGGCAACACTTAGATGTATGCAGGCTTTGGTCACAGCACAAGCTAGAGCTCGTGCTCAGAGGATCCAAATGATGTCAGAAGGAAAGCATAATCAAAATCAACCAACTCACAGAAATGTTATGGAAAATGACCTGTTCAGGCAAATATATAATGAAATGGACAGAGGCATGGAAGACAACATCAAGATTGTGGAAATGGATGTATGTGAATCAAAAGGTAACTCTACAAGCAGAAGCAGCAGTGTATATCATCATGAACATTCAGAACATAGATATTCCACAAATGGTTCTTACTCAAAAGAAGAAAACTACAAAGTATCACCAGCTCCATCAGCTTTAACAGAATTGAGTCCAAAAGCATGCAGTGGCCATTTTGAGGATTGTTTCAGTACAGCTCAAAGCAGCCCTCAATACTATTCAGCTGTATCTAAAACAGACGATTCAAACCATCCTTTTTCATTCCCTAATCCATCTTATGGAGAACCTATTATGTCCTATGACTACCCTTTATACCCAAATTACATGGCTAACACAAAATCATCGAGTGCTAAAGTCAGATCACAAAGTGCACCGAAACAAAGGCCGGATTCATTTGAGAGACAACCGAGCCGGCGAAGAGTTTCAGTGGAAGGAAGAAATGTACCTAGGCCAGTGAGGATGCAAAGGTCATCTTCACATGTGAGTGCAACTGCTCAGAACTATCAATATCCATGGTCAATCAAGCTTGATAGATCTGCAGTTTCACTCAGAGACAGTGAGTGTGGTTCTACAAGTACAATGCTCACTAATACTAACTACTGCAGATCCCTTGTTGCATATGATCCAAATGAAGATAGGTACTGA 1380 0.3804 MGKKGKWLRNFLTGKKDRDKEKEKSITHQNFANGTENPTTPISTTPKEKKRWSFRRSSASATPTASKELNFVETNSNVTASVTVETVKDIQNEQRNHAMAVAVATAAAADAAVAAAEAAAAVIRLTSGSNETSRSAEDAAAIRIQCVFRSHLARKALCALRGLVKLQALIRGHLVRKQAKATLRCMQALVTAQARARAQRIQMMSEGKHNQNQPTHRNVMENDLFRQIYNEMDRGMEDNIKIVEMDVCESKGNSTSRSSSVYHHEHSEHRYSTNGSYSKEENYKVSPAPSALTELSPKACSGHFEDCFSTAQSSPQYYSAVSKTDDSNHPFSFPNPSYGEPIMSYDYPLYPNYMANTKSSSAKVRSQSAPKQRPDSFERQPSRRRVSVEGRNVPRPVRMQRSSSHVSATAQNYQYPWSIKLDRSAVSLRDSECGSTSTMLTNTNYCRSLVAYDPNEDRY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01291 459 MobiDBLite consensus disorder prediction 376 391 - -
Car04g01291 459 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 436 - -
Car04g01291 459 MobiDBLite consensus disorder prediction 10 27 - -
Car04g01291 459 Pfam Protein of unknown function (DUF4005) 322 392 IPR025064 -
Car04g01291 459 MobiDBLite consensus disorder prediction 28 47 - -
Car04g01291 459 ProSiteProfiles IQ motif profile. 161 188 IPR000048 GO:0005515
Car04g01291 459 Pfam IQ calmodulin-binding motif 164 180 IPR000048 GO:0005515
Car04g01291 459 Pfam IQ calmodulin-binding motif 139 157 IPR000048 GO:0005515
Car04g01291 459 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Car04g01291 459 SMART iq_5 159 180 IPR000048 GO:0005515
Car04g01291 459 SMART iq_5 136 158 IPR000048 GO:0005515
Car04g01291 459 MobiDBLite consensus disorder prediction 1 64 - -
Car04g01291 459 MobiDBLite consensus disorder prediction 358 407 - -
Car04g01291 459 MobiDBLite consensus disorder prediction 358 375 - -
Car04g01291 459 MobiDBLite consensus disorder prediction 253 282 - -
Car04g01291 459 Gene3D - 136 209 - -
Car04g01291 459 ProSiteProfiles IQ motif profile. 137 165 IPR000048 GO:0005515
Car04g01291 459 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01291 Car-Chr4 13252446 13255125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01291 1 447 IQD Protein Family AT4G14750 44.924 5.57e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01291 - - gmx:100817667 647.506