Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01271 ATGGCCTCTAAAACTGAAAGTGAGAGTCCAATGGATACTACACCGTCAACGCCAAAGAATATATACAAGGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAACCGATACTTTGAGGATGATGCGTTTATTGGGTACTTGAAGTATCTTCAATATTGGCAACGCCCTGAATATATTAAATTTATTATGTATCCTCACTGCCTCTATTTTCTCGAGCTTCTTCAGAATGCAAATTTTCGTAATGCAATGGCTCATCCTAGCAATAAGGAATTGGCACATAGACAGCAGTTCTACTACTGGAAGAACTATAGGAATAATCGGCTAAAACACATATTACCAAAATCACTTCCAGAACCTACTGCTGCACTTCCAGCTCCTGCTTCAACTCAGGCCCAGCCACCTGTGCCGGCACTACCACCAGTACCTGCATCAAGCGTTGCTATGACAACATCTTCTTCCCAAGCTCCTTCTCCAATGCCATATGGTGGCTCTGGTCTTGCAAAAAACGACATGAGGAATCCTGCGGTTGATAGAAGGAAAAGAAAGTGA 606 0.4307 MASKTESESPMDTTPSTPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDDAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYYWKNYRNNRLKHILPKSLPEPTAALPAPASTQAQPPVPALPPVPASSVAMTTSSSQAPSPMPYGGSGLAKNDMRNPAVDRRKRK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01271 201 MobiDBLite consensus disorder prediction 1 24 - -
Car04g01271 201 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 12 201 - -
Car04g01271 201 MobiDBLite consensus disorder prediction 1 20 - -
Car04g01271 201 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Car04g01271 201 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Car04g01271 201 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 12 201 IPR008831 GO:0003712|GO:0006355|GO:0016592
Car04g01271 201 MobiDBLite consensus disorder prediction 141 201 - -
Car04g01271 201 MobiDBLite consensus disorder prediction 163 178 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Car04g01271 Med31 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01271 K15153 - gmx:100527879 340.502