Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01269 ATGGAAGAAAATGGGTTGGTACTGTTGTTTTATGTTGGCCAACATAACTTGAGGTTTCTTATGTTTCCTGTGACATTGACGCTTCTCATGCTGTTGGTTTTTTCTCCATTTGCTTCTCCACTCAGCGAAGAAGGACAAGCATTAATGGCAATGAAGTCTTCCTTCAAcaatatagctgacgttctacttgactgggatgatgtacacaatgatgacttgtgctcatggcgtggagtgttctgtgataatgtcactCTTACTCAAACAGTGGTGTCACTGAATTTATCAAGCTTGAACCTTGGTGGTGAGATATCACCAGCAATTGGTGGTTTAAGAAATTTGCAGTCCATAGACTTGCAAGGGAATAAACTAACTGGTCAAATCCCAGATGAAATTGGAAACTGTGGTGCACTCGTTCATCTGGATTTATCTGATAATCTGCTTTATGGGGATATACCTTTCTCCATATCAAAGCTGAAGCAACTTGAGTTTTTGAATTTGAAGAACAATCAGTTGACTGGTCCTATTCCTTCAACTTTAACCCAAATTCCTAACCTCAAGACTCTTGATCTTGCTCGAAATAGGCTCACTGGAGAGATACCAAGGCTACTCTATTGGAATGAAGTTTTGCAATACCTTGGATTGCGAGGAAACATGTTGACTGGAACTTTGTCTCCTGATATCTGCCAGTTAACTGGTCTGTGGTACTTTGATGTCAGAGGAAATAATTTGACTGGTACTATACCTGAAAGCATTGGCAACTGTACAAATTTTGAAATCTTGGACATATCATATAATCAGATTTCTGGGGAGATTCCTTATAATATTGGATTTCTTCAAGTGGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGAAAGATACCAGATGTAATTGGTTTGATGCAAGCCCTTGCAATTTTGGATTTGAGTGAGAATGAGTTAGTGGGTCCAATTCCTCCAATACTAGGAAACCTGTCTTTCACCGGCAAGCTGTACCTTCATGGAAACAAACTTACTGGTTCAATACCTCCTGAGCTTGGCAATATGTCTAAACTGAGCTACCTGCAATTGAATGACAATCAACTGGTGGGTAAAATTCCTAACGAGTTTGGGAAGCTTGAACTTCTGTTTGAATTGAATCTTGCCAATAATCGTCTTGATGGATCTATTCCACATAACATAAGCTCCTGCACAGCCTTAAATCAGTTTAATGTGCATGGGAATCAGTTAAGCGGTTCTATTCCATTGAGCTTTCGCAGCCTTGAGAGTTTGACTTACTTGAATCTCTCTGCCAACAACTTCAAAGGAAACATACCGGTTGAGTTGGGTCATATCATTAATCTTGATACACTGGACCTATCTAGCAATAACTTTTCAGGGCATGTACCAGCATCTGTTGGTTATCTAGAGCATCTTTTGACCCTGAACTTGAGTCATAATCATCTTGATGGTCCCTTGTCTGCTGAATTTGGCAATCTCAGAAGCATACAGATTATTGATATGTCCTTCAACAACCTTTCGGGGAGCATTCCTCCAGAGATTGGACAGCTGCAGAACCTTGCGTCTCTGATTTTGAACAACAATGACTTGCACGGGAAGATTCCTGATCAGCTCTCCAATTGTTTCAGTCTTTCTTCCCTAAACTTTTCTTATAACAACTTCACTGGAGTAGTTCCATCTATGAAGAACTTCACGCGATTCTCAGCTGACAGCTTCTTTGGGAATCCTTTGTTATGTGGAAATTGGGAAGGATCTATATGTCGTCCTTATATTCCAAAATCAAGAGAGATTTTTTCTAGAGTTGCAGTTGTATGTCTTGCTCTTGGTATCATCATGTTACTGGCTATGGTAATTGTCGCTATCTATAGAACCCGCCAATCCAAGCAGTTGATTAAAGGATCTAGCAGGACAGGGCAAGGGCCACCTAAACTTGTAATTCTTCATATGGATTTGGCAATTCACACTTTGGATGACATAATGAGAAACACTGAGAATCTCAGTGAGAAATTTATTATTGGATATGGTGCCTCTAGTACTGTATACAAGTGTGCGTTGAAAAGTTCCCGACCAATTGCAGTCAAGCGCTTGTACAATCAGCATCCACACAATTTAAGGGAATTTGAAACTGAACTCGAAACAATAGGCAACATTAGACATCGAAATCTTGTCACCTTGCATGGTTATGCCCTTACTCCATATGGAAATCTCCTTTTTTATGAGTACATGGCAAATGGCTCTCTTTGGGATCTTCTACACGGTCCATTGAAGGTAAAACTTGATTGGGAAACCCGGATGAGGATCGCCGTTGGAGCTGCCGAAGGACTTGCTTATCTTCACCATGACTGCATTCCCCGAATTGTTCACAGGGACATTAAATCTTCAAATATTTTGCTGGATGAAAACTTTGAGGCTCACCTATCTGATTTTGGCACTGCAAAATGTATCCCAGCCACAAGAACTCACGCCTCAACTTATGTTCTTGGAACTATAGGCTATATTGATCCTGAATATGCACGAACATCAAGGTTGAATGAAAAATCAGATGTTTATAGCTTTGGTATTGTTCTGCTAGAGCTACTTACTGGAAAGAAGGCAGTGGACAATGATTCCAATTTGCATCACTTGATACTTTCCAAGGCGGAAAATAACACTATAATGGAGGCTGTGGATCCAGAAGTCTCCATTACCTGCATTGATTTGGCTCATGTCAAAAAGACCTTTCGGCTTGCTTTGCTTTGCACTAAAAAGAACCCTTCAGAGAGACCTACGATGCATGAAGTAGCCAGGGTGCTTATTTCCCAACTTCCTGCACCTCCAAGTAAAGTTGTTGCTGCTGCTGCTAAGAGTTTTGACTACAACCAAAAAGTTGATGGACTACAACCTCAGCCGGATAACAATGCTTCTAATGCTCAATGGTTTGTTCGATTTGGGGATGATATATCCAAGAGCACTCTCTGA 2961 0.3928 MEENGLVLLFYVGQHNLRFLMFPVTLTLLMLLVFSPFASPLSEEGQALMAMKSSFNNIADVLLDWDDVHNDDLCSWRGVFCDNVTLTQTVVSLNLSSLNLGGEISPAIGGLRNLQSIDLQGNKLTGQIPDEIGNCGALVHLDLSDNLLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLTGTLSPDICQLTGLWYFDVRGNNLTGTIPESIGNCTNFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPDVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNDNQLVGKIPNEFGKLELLFELNLANNRLDGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRSLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLDGPLSAEFGNLRSIQIIDMSFNNLSGSIPPEIGQLQNLASLILNNNDLHGKIPDQLSNCFSLSSLNFSYNNFTGVVPSMKNFTRFSADSFFGNPLLCGNWEGSICRPYIPKSREIFSRVAVVCLALGIIMLLAMVIVAIYRTRQSKQLIKGSSRTGQGPPKLVILHMDLAIHTLDDIMRNTENLSEKFIIGYGASSTVYKCALKSSRPIAVKRLYNQHPHNLREFETELETIGNIRHRNLVTLHGYALTPYGNLLFYEYMANGSLWDLLHGPLKVKLDWETRMRIAVGAAEGLAYLHHDCIPRIVHRDIKSSNILLDENFEAHLSDFGTAKCIPATRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKAENNTIMEAVDPEVSITCIDLAHVKKTFRLALLCTKKNPSERPTMHEVARVLISQLPAPPSKVVAAAAKSFDYNQKVDGLQPQPDNNASNAQWFVRFGDDISKSTL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01269 986 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Car04g01269 986 Gene3D Ribonuclease Inhibitor 207 318 IPR032675 -
Car04g01269 986 SUPERFAMILY L domain-like 325 581 - -
Car04g01269 986 SUPERFAMILY L domain-like 43 341 - -
Car04g01269 986 Pfam Leucine Rich repeat 254 271 IPR001611 GO:0005515
Car04g01269 986 Pfam Leucine Rich repeat 184 199 IPR001611 GO:0005515
Car04g01269 986 Pfam Protein kinase domain 671 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01269 986 SMART LRR_typ_2 374 398 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 422 446 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 518 542 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 470 493 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 111 135 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 350 373 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 183 207 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 159 182 IPR003591 -
Car04g01269 986 SMART LRR_typ_2 231 255 IPR003591 -
Car04g01269 986 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Car04g01269 986 Gene3D Phosphorylase Kinase; domain 1 634 742 - -
Car04g01269 986 Gene3D Ribonuclease Inhibitor 41 206 IPR032675 -
Car04g01269 986 SUPERFAMILY Protein kinase-like (PK-like) 645 932 IPR011009 -
Car04g01269 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 32 969 - -
Car04g01269 986 Gene3D Transferase(Phosphotransferase) domain 1 743 940 - -
Car04g01269 986 ProSiteProfiles Protein kinase domain profile. 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01269 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Car04g01269 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 32 969 - -
Car04g01269 986 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Car04g01269 986 Pfam Leucine rich repeat 331 387 IPR001611 GO:0005515
Car04g01269 986 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Car04g01269 986 Gene3D Ribonuclease Inhibitor 319 590 IPR032675 -
Car04g01269 986 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Car04g01269 986 SMART serkin_6 667 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01269 Car-Chr4 13000613 13008002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01269 113 986 Receptor kinase-like Gene Family AT5G07180 77.486 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Car04g01269 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01269 K20718 - gmx:100811653 1668.67