Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01261 ATGAGTTGCATTCTAACATTCTGTTTCCTCTTGAGTTTTATAGTCGTATCTTCAAATGCTGAATTTGTCAAAAAGACCTACATAATTCAAATGGACAAGTCAGCAAAACCAAACATTTTTTCCAATCACAAAGAATGGTATTCATCAAAAGTTAAGTCAGTAATGTCTATATCATTAGAAGCTGAGAGAGACAACAACAATGAAGAGAGAATCATTTATAATTACAACACTGCCTTTCATGGAATGGCTGCTAAATTAAGCCAAAAAGAAGCAAATAAGCTAGAAGATGAAGATGGTGTTGTAGCCATATTCCCTGATACAAAGTATCAGCTACACACAACAAGAAGTCCATCTTTTCTTGGTCTTGAACCAATTATACAAAGCAACAACAATAACAGCTTGTCACAAAATCTGGTTGATAATGACCAAAATGTTATAGTTGGTGTGTTAGACACTGGTATTTGGCCTGAAAGTGAGAGTTTCAATGACACAGGAATGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAAAGGGTTCGAAAAACATCACTGCAATAACAAGATTATAGGTGCAAGAATATTCTACCAAGGTTATGAAGCAGCATATGGTAGGATTAATGAACAAGCAGATTACAAatcaccaagagatcaagatggtcacggaacacacacagcagctactgttgctggttcaccagttcatggtgctaatcttcttggctatgcttatggaaaagcaagaggaatggcaccaaatgcaagaattgcagcttacaaagtttgttggtcaggtggctgtttcggctcagatattctgtcagctcttgatagagctgtagctgatggtgtcaatgttctttccatttcgttaggcggcaaattctcgtcttattacctcgataatttatcggtagcttcgttcggagcaatggagaaaggtgtttttgtttcatgttcagctggaaatgcaggacctaatcctgctagtctcacaaatgcttcaccttggATTACAACAGTTGGAGCTAGCACAATTGACAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAAATCACGGGAACTTCACTCTACAAAGGAAAAACAATGCTCTCAGTTAAAAAACAGTATCCTTTGGTTTACATGGGAGGTAACTCAACTAGTCCTGATCCAAGATCTTTGTGTTTAAAAGGTACTTTAAATCGCCAAACCGTCGCCGGAAAAATCGTGATTTGTGATAGTGGAATTATATCTGGATTGCAAAAGGGTCAGGAAGTGAAAGATGCAGGAGGTGTAGGAATGATACTAACAAACACAGCAGCTAATGGTGATGAGATTGTGGCAGATTGTCACCTACTTCCAGCAATAGCAATAGGAGAAAAAGAAGGCAAAGAAATCAAACAATATGTGTTAACAAATAAAAATGCTACTGCAACACTAGCTTTTCTTGACACAAGATTAGGATTTAAACCATCACCTATAGTAGCAGCATTTTCATCAAGAGGGCCTAATTATCTAACACCAGAAATTCTAAaacctgatatagttgctcctggtgtgaacattcttgctgcttggagtggtgtcactggtccatcaagtttaccaacagatcaaagaagagtgaaattcaatatactttctggtacttcaatgtcaagtccacatgttagtggaattgctgctatgataaaatctaaacatcctgaatggagtccagctgctataaaatctgctatcatgacaacagCTTATGTTCTTGATAATACAATCCAACCTATAAAAGATTCTTCATCTGATGAACCTTCAACACCTTATGCTCATGGTGCAGGACACATTAATCCTATAAAAGCTCTTGAACCAGGTTTAATATATGATATTGAACCACAAGATTACTTTGAGTTCCTTTGTACACAGCGAACAGAATTAAGAGGTTTTGCTATATATTCAAATAGAGTATGTAGAAACACTCTTGAAAGTGCAGGGGACTTGAATTATCCGGCTATATCAATAGTGTTTCCGAATAAAACATTGACTTCAGAAATGACGATTCGTAGAACTGTCACCAATGTTGGACCTGATGTTTCAAAATATCAAGTCATTGTTACACCTTTCAAAGGTAGTGTTGTGAAAGTTGAGCCAGATACATTGAATTTCACAAGAAAGTATGAGAAATTGTCTTATAAGGTTACTTTCAAAGCCACGTCTAGGCAAAGTAATCCAGAATTTGGAGGTTTGGTGTGGAAAGATGGTGAGCATGAACCCCAATTCATTCAATGGTTTAAGGGATCCCTTGAAACTGCTCTTATAGTGTGTACAACAACGAAAACATACATACCTGATTCCTTGTTGCGCGAATATCGCAGAGTAGAAGGCAGCTTTGTTGCTTCAGGTCCCGGATCAGTGAGATCCACGCCGGTGGGTTCTCTGTTTGATTTCGATCATAACAGATAG 2472 0.282 MSCILTFCFLLSFIVVSSNAEFVKKTYIIQMDKSAKPNIFSNHKEWYSSKVKSVMSISLEAERDNNNEERIIYNYNTAFHGMAAKLSQKEANKLEDEDGVVAIFPDTKYQLHTTRSPSFLGLEPIIQSNNNNSLSQNLVDNDQNVIVGVLDTGIWPESESFNDTGMKPVPSHWKGACETGKGFEKHHCNNKIIGARIFYQGYEAAYGRINEQADYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGKARGMAPNARIAAYKVCWSGGCFGSDILSALDRAVADGVNVLSISLGGKFSSYYLDNLSVASFGAMEKGVFVSCSAGNAGPNPASLTNASPWITTVGASTIDRDFPADVSLGNGRKITGTSLYKGKTMLSVKKQYPLVYMGGNSTSPDPRSLCLKGTLNRQTVAGKIVICDSGIISGLQKGQEVKDAGGVGMILTNTAANGDEIVADCHLLPAIAIGEKEGKEIKQYVLTNKNATATLAFLDTRLGFKPSPIVAAFSSRGPNYLTPEILKPDIVAPGVNILAAWSGVTGPSSLPTDQRRVKFNILSGTSMSSPHVSGIAAMIKSKHPEWSPAAIKSAIMTTAYVLDNTIQPIKDSSSDEPSTPYAHGAGHINPIKALEPGLIYDIEPQDYFEFLCTQRTELRGFAIYSNRVCRNTLESAGDLNYPAISIVFPNKTLTSEMTIRRTVTNVGPDVSKYQVIVTPFKGSVVKVEPDTLNFTRKYEKLSYKVTFKATSRQSNPEFGGLVWKDGEHEPQFIQWFKGSLETALIVCTTTKTYIPDSLLREYRRVEGSFVASGPGSVRSTPVGSLFDFDHNR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01261 823 CDD PA_subtilisin_like 356 486 - -
Car04g01261 823 Pfam Peptidase inhibitor I9 26 112 IPR010259 -
Car04g01261 823 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 758 IPR045051 -
Car04g01261 823 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Car04g01261 823 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Car04g01261 823 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Car04g01261 823 Pfam Fibronectin type-III domain 669 760 IPR041469 -
Car04g01261 823 PANTHER XYLEM SERINE PROTEINASE 1 17 758 - -
Car04g01261 823 CDD Peptidases_S8_3 109 591 IPR034197 -
Car04g01261 823 Gene3D - 350 493 - -
Car04g01261 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Car04g01261 823 Gene3D - 642 764 - -
Car04g01261 823 SUPERFAMILY Subtilisin-like 111 629 IPR036852 GO:0004252|GO:0006508
Car04g01261 823 ProSiteProfiles Serine proteases, subtilase domain profile. 119 625 - -
Car04g01261 823 SUPERFAMILY Protease propeptides/inhibitors 25 110 - -
Car04g01261 823 Gene3D Peptidase S8/S53 domain 144 638 IPR036852 GO:0004252|GO:0006508
Car04g01261 823 Pfam PA domain 382 472 IPR003137 -
Car04g01261 823 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 112 IPR037045 -
Car04g01261 823 Pfam Subtilase family 143 601 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01261 Car-Chr4 12908401 12911855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01261 13 767 Subtilisin-like Serine Gene Family AT5G51750 64.767 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01261 - - gmx:102661592 1178.7