Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01260 ATGGCTAAGCATCCAATAATCACTCCAATGGAAAAAATGAGTTTCATTCTAACATTCTGTTTCCTCTTGAGTTTTATTGTCTTATCTTCAAATGCTGAATTTGCCAAAAAGACTTACATCATTCAAATGGACAACTCAGCAAAACCAGACATTTTTTCCAATCACCAAGAATGGTATACATCGAAAGTTAAGTCAGTAGTTTATAAATCATTAGAAGCTGATGAGATAGACAACAATATTGAAGATAGAATCATTTACAATTACAACACTGCTTTTCAAGGAATGGCTGCAAAGTTAAGCCAAGAAGAAGCAAAGAAGCTAGAAAATGAAGATGGTGTTGTAGCCATTTTTCCTGATACAAAGTATCAGCTTCACACAACAAGAAGTCCATCTTTTCTTGGTCTTGAACCAATTATACAAACAAAAAACAACTTCTCAAAAAAGCTAGTTGATGACCATGATGTTATTGTTGGTGTGCTAGACACGGGTGTTTGGCCTGAAAGTGAGAGTTTCAGTGATATAGGAATGAAACCAGTACCTTCTCATTGGAAAGGTGCATGTGAAACTGGTAGAGGCTTCAGAAAACATCACTGCAATAACAAGATTATAGGTGCAAGAATATTCTACCATGGTTATGAAGCAGCAACaggtaaaattgatgaacaagcagatttcaaatcaccaagagatcaagatggtcatggaacacacactgcagctactgttgctggttcaccagttcatggtgctaatcttcttggctatgcttctggaacagcaagaggaatggcaccaaatgcaagaattgcagcttacaaagtgtgttggtcaggtggatgcttcagctcagatattctgtcagctgtggatagagctgtagctgatggtgtcaatgttctatccatctctttaggcggcggagtctcgtcttactatcgagatagtttatcggtcgcttcgtttggagcgatggagaaaggtgtttttgtttcatgttcagctggaaatgcaggacctgatcctgttagtctcacaaatgtttcaccttggatcacaacagttggagctagcacaatggatagagattttCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAAATCACAGGAACTTCACTCTACAAAGGAAAAACAATGCTCTCAGTTAACAAACAGTATCCTTTGGTTTACATGGGAGGTAACTCAACTAGTCCTGATCCAAGATCTTTGTGTTTGGAAGGTACTTTAGATCGCCGAGCCGTTGCCGGTAAAATCGTGATTTGTGATAGAGGAATTAGTCCTAGAGTGCAAAAGGGTCAGGTAGTGAAAAGTGCAGGAGGTGTAGGAATGATACTAACAAACACAGCAGCTAATGGTGAGGAGCTTGTAGCAGATTGTCACCTACTTCCAGCAATAGCAATAGGAGAAAAAGAAGGCAAAGAAATCAAACAATATGTGTTAACAAATAAAAAAGCTACTGCAACATTAGCTTTTCTTAACACAAGATTAGGAATTACACCATCTCCTATAGTAGCAGCATTTTCATCAAGGGGGCCTAATTTTCTAACACTAGAAATTCTTAAGCCTGATATAGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGTGTTACTGGTCCATCAAGTTTACCAACAGATCGAAGAAGAGTGAAATTCAATATACTTTCTGGAACTTCAATGTCATGTCCACATGTTAGTGGAATTGCTGCTATGATAAAGTCTAAACATCCTGAATGGAGTCCAGCTGCTATAAAATCAGCTATCATGACAACAGCTTATGTTCATGATAACACAATCAAACCTCTTAAAGATGCTTCATCTGATGAACCTTCAACACCTTATGATCACGGTGCAGGACACATTAATCCTAGAAAAGCACTTGAACCAGGTTTAGTATATGATATTAAACCACAAGATTACTTTGAGTTTCTTTGTACACAGAAACTAACTCCAACAGAATTAGGAGTTTTTGCTAAAAATTCAAAGAGAGTTTGTAGAAACACTTTTGCTAGTGCAGGGGATTTGAACTATCCGGCTATATCGGTAGTGTTTCCGGAGAAAGCATCGACTTCAGAAATGACGATTCATAGAACTGTCACCAATGTTGGACCTGATGTTTCAAAATATCATGTCATTGTTACACCTTTCAAAGGTAGTGTTGTGAAAGTTGAGCCAGATACATTGAATTTCACAAGAAAGTATGAGAAATTGTCTTATAAGGTTACTTTCAAAGCAACAACTAGGCTAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATGGGGTGCATAAAGTAAGAAGCCCTATTGTGATAACATATTTGCCACCAATATGA 2361 0.3033 MAKHPIITPMEKMSFILTFCFLLSFIVLSSNAEFAKKTYIIQMDNSAKPDIFSNHQEWYTSKVKSVVYKSLEADEIDNNIEDRIIYNYNTAFQGMAAKLSQEEAKKLENEDGVVAIFPDTKYQLHTTRSPSFLGLEPIIQTKNNFSKKLVDDHDVIVGVLDTGVWPESESFSDIGMKPVPSHWKGACETGRGFRKHHCNNKIIGARIFYHGYEAATGKIDEQADFKSPRDQDGHGTHTAATVAGSPVHGANLLGYASGTARGMAPNARIAAYKVCWSGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVASFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKITGTSLYKGKTMLSVNKQYPLVYMGGNSTSPDPRSLCLEGTLDRRAVAGKIVICDRGISPRVQKGQVVKSAGGVGMILTNTAANGEELVADCHLLPAIAIGEKEGKEIKQYVLTNKKATATLAFLNTRLGITPSPIVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGVTGPSSLPTDRRRVKFNILSGTSMSCPHVSGIAAMIKSKHPEWSPAAIKSAIMTTAYVHDNTIKPLKDASSDEPSTPYDHGAGHINPRKALEPGLVYDIKPQDYFEFLCTQKLTPTELGVFAKNSKRVCRNTFASAGDLNYPAISVVFPEKASTSEMTIHRTVTNVGPDVSKYHVIVTPFKGSVVKVEPDTLNFTRKYEKLSYKVTFKATTRLSEPEFGGLVWKDGVHKVRSPIVITYLPPI 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01260 786 Pfam Subtilase family 153 606 IPR000209 GO:0006508|GO:0008236
Car04g01260 786 SUPERFAMILY Protease propeptides/inhibitors 37 123 - -
Car04g01260 786 PANTHER XYLEM SERINE PROTEINASE 1 28 780 - -
Car04g01260 786 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Car04g01260 786 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Car04g01260 786 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Car04g01260 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 780 IPR045051 -
Car04g01260 786 Pfam PA domain 392 482 IPR003137 -
Car04g01260 786 CDD PA_subtilisin_like 366 496 - -
Car04g01260 786 Gene3D Peptidase S8/S53 domain 154 648 IPR036852 GO:0004252|GO:0006508
Car04g01260 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 125 IPR037045 -
Car04g01260 786 Gene3D - 360 503 - -
Car04g01260 786 Pfam Fibronectin type-III domain 682 780 IPR041469 -
Car04g01260 786 Pfam Peptidase inhibitor I9 38 125 IPR010259 -
Car04g01260 786 ProSiteProfiles Serine proteases, subtilase domain profile. 132 635 - -
Car04g01260 786 CDD Peptidases_S8_3 122 601 IPR034197 -
Car04g01260 786 Gene3D - 652 783 - -
Car04g01260 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Car04g01260 786 SUPERFAMILY Subtilisin-like 124 639 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01260 Car-Chr4 12900908 12903709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01260 9 786 Subtilisin-like Serine Gene Family AT5G51750 68.590 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01260 - - gmx:102661592 1295.8