Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01259 ATGTCCACGTCATCACCACCTCAACCAAACAAGAAACAGAGTTCCACCGTCGTCTCCGGTTGTTCTCTCATCTTTGCACTTCTTCACTGCCTCCGGAACAAAAAACGAACCACTCCATCCTTCGATTCCGACTCCAATCCCCCTCATCCTTTCTCCTACACCCTCCTCCGCCGCGCCACAAACTCCTTCTCAACTCTCCTTGGCCATGGCGGCTTTGGTCCCGTCTATTCCGGTTCCCTCCCCTCATCCGGTAAACCCATCGCCGTCAAGCTCATGGACTCTACCTCCTCTCAAGGCGAACACGAATTCCACAACGAACTCTTCTTCGCTTCGAGACTCCGCTCTAACCTCCTCGTTCCCGCCATTGGCTTCTCCTCCGATCACAAACGCCGTCGTTTCCTTCTCGTTTACGAATTAATGCACAACGGTAACCTCCACGACGCACTCCTCCGTCGCAAACTCCCCGAACTCATGCTCTGGAAAACGCGGTTTTCAATAATCCTCGAAATCGCTAAAGGAATTCAATATCTTCATTCATGCGATCCACCAATCATTCACGGtgatattaaacctagtaacattcttcttgataattattttttcgctaaaatcgccgatttcggactcgctaGGTTTAAAACACTTCCCAATTTCGAAATCAGAAAAGATCATGAATTGGAAAGTGATGGCATGGAAACTGAGAGTTTCAACACTAGCTTTGATGAATACGAGAAAGAAAGTGCTGGTGTTGTTGTTGTTGGTGGAGTGAAGAAGAGTGGGAGCGTGAAGGATTATGTTATGGATTGGATTGGAAAAGAGGTGAAGAATGATGAATTGGgtgggtgtggaagtggaactggaagtcgaaggggtgtgaacagtaaaagtaagaagaaattggagtggTGGGAATCAATGGATAATGTGGGAAAAGCTGATATGAAAAAGGAGAAGAGAAGATCAGTAAGGGAATGGTGGAAGGAGGAACATTCTCAAGAGGTTGagaaaaagaagaagaaaaagaaAATGGGTGGAAAAAATAGTGATAATTGGTGGGAAAATGAGAGAGATTATGATGTGAAAAAAAGGAATAGTAAAAATCGTTCTAAGAAGGAACGTGGTAGTGTTGATTCGTGGTTGAGTGGTGAGTTAAGGAGAGTTGGTTGTAATAACTATGATTCATGTAATAATAGCGGAGAAATTCCAAAGAGTGGTGGAATAAGCAATAGTACTTCACCAAGTATGAGAGGGACAGTTTTTTATGTTGCTCCTGAAAATGGCTATAGTGGTGATGTAACAGAGAAGTGTGATGTTTATAGTTTTGGGGTGTTATTGCTTGTTATTATTTCTGGGAGGAGGCCACTTGAGGTGAATGGTGATGGATTCACACATGTGTTAGAGTTTAAGAGAGCCAATTTGGTGTCTTGGGCTAGACATTGTGCTCGCAAGGGGAAACTACTTGAACTAGTTGATCCATCTGTTGAGTTGTTGTTGGATGATGATAAAGAGAAGGCTCTTGTATGCATCAAAATTGCATTGCTTTGTTTGGTTAAGTCAGCTAATCGTCGTCCTTCGATGAAAGATGTTGTCGGTATGCTTAGTGGGGAATTGGAGGTACCTCAATTGCCGCATGAGTACTCACAATCTCCGTTTCAATTCAAGAATTTAAAACAAGGCTTGTGA 1683 0.3975 MSTSSPPQPNKKQSSTVVSGCSLIFALLHCLRNKKRTTPSFDSDSNPPHPFSYTLLRRATNSFSTLLGHGGFGPVYSGSLPSSGKPIAVKLMDSTSSQGEHEFHNELFFASRLRSNLLVPAIGFSSDHKRRRFLLVYELMHNGNLHDALLRRKLPELMLWKTRFSIILEIAKGIQYLHSCDPPIIHGDIKPSNILLDNYFFAKIADFGLARFKTLPNFEIRKDHELESDGMETESFNTSFDEYEKESAGVVVVGGVKKSGSVKDYVMDWIGKEVKNDELGGCGSGTGSRRGVNSKSKKKLEWWESMDNVGKADMKKEKRRSVREWWKEEHSQEVEKKKKKKKMGGKNSDNWWENERDYDVKKRNSKNRSKKERGSVDSWLSGELRRVGCNNYDSCNNSGEIPKSGGISNSTSPSMRGTVFYVAPENGYSGDVTEKCDVYSFGVLLLVIISGRRPLEVNGDGFTHVLEFKRANLVSWARHCARKGKLLELVDPSVELLLDDDKEKALVCIKIALLCLVKSANRRPSMKDVVGMLSGELEVPQLPHEYSQSPFQFKNLKQGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01259 560 ProSiteProfiles Protein kinase domain profile. 61 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01259 560 MobiDBLite consensus disorder prediction 311 338 - -
Car04g01259 560 Gene3D Transferase(Phosphotransferase) domain 1 395 544 - -
Car04g01259 560 Gene3D Transferase(Phosphotransferase) domain 1 140 238 - -
Car04g01259 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Car04g01259 560 SUPERFAMILY Protein kinase-like (PK-like) 45 550 IPR011009 -
Car04g01259 560 Pfam Protein tyrosine and serine/threonine kinase 64 225 IPR001245 GO:0004672|GO:0006468
Car04g01259 560 PANTHER OS07G0586332 PROTEIN 2 558 IPR044576 -
Car04g01259 560 SMART serkin_6 61 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01259 560 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 2 558 - -
Car04g01259 560 Gene3D Phosphorylase Kinase; domain 1 49 139 - -
Car04g01259 560 MobiDBLite consensus disorder prediction 311 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01259 Car-Chr4 12889606 12891883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01259 403 533 Receptor kinase-like Gene Family AT3G58690 35.556 9.41e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Car04g01259 PK_Tyr_Ser-Thr 3.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01259 - - aprc:113872924 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01383 08 22074149 22077542 Car04g01259 04 12889606 12891883 PCT