Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01256 ATGTCATTGAAATGTTTATGTTGTTTCTCTAAAGAAAAAGAGCAAAGACATAGAAGGAATGTGGATGACAAGAAAAATATTAGAGACTATCCATGGGAAAGATACACCTTGAAGGAGTTGCTTCGTGCAACAAACAATTTTCATCAAGATAACAAAATTGGAGAGGGTGGATTTGGAAGTGTATATTGGGGTCGGACAAGTAAAGGCGTTGAGATTGCTGTGAAGCGATTGAAGACAATGACTGCAAAAGCAGAGATGGAATTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTGAGGCATAAGAACTTGTTAGGGTTGAGGGGATTCTATGCAGGAGGAGAAGAAAGGTTAATTGTGTATGATTACATGCCTAATCACAGCTTGCTCACTCATTTGCATGGTCAACTTGCCTCAGATTGTCTACTAGATTGGCCTAAAAGAATGAACATTACAATTGGAGCAGCTGAAGGCTTAGAGTATTTGCACCATGAGGCAAATCCTCACATAATTCATAGAGACATAAAGGCAAGCAATGTTCTATTAGACACAGAATTTGAAGCCAAAGTTGCTGATTTTGGTTTTGCAAAGCTAATACCAGAAGGTGTAAGCCATCTTACAACAAGAGTTAAAGGCACACTTGGATATTTGGCACCAGAATATGCTATGTGGGGTAAAGTTTCTGAGAGTTGTGATGTTTATAGTTTTGGGATATTGCTTTTGGAGATTATAAGTGCAAAGAAACCAATTGAAAAACTACCTGGTGGAATAAAAAGGGACATTGTTCAATGGGTCACACCATATGTCCAAAAGGGTGTTTTCAAACATATTGCTGATCCAAAATTGAAAGGGAATTTTGATTTAGAGCAATTGAAATCTGTGATTATGATTGCTATGAGGTGCACAGATAGTAGCCCTGATAAAAGGCCTAGTATGGAAGAGGTGGTGGAATGGCTGAAAGATGGTGTTTTGAAGAGGAAAAAAGATATTCCTAATTTGAGTAATAAGGGAAATGAAGAAAATGATGAAAACTATGAAGAGTTTGTTACAATGCAGTCGAACAACCTTAAAATACTAAGTGATAATGATGGCCGCAAAATGAGATGA 1104 0.3759 MSLKCLCCFSKEKEQRHRRNVDDKKNIRDYPWERYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLASDCLLDWPKRMNITIGAAEGLEYLHHEANPHIIHRDIKASNVLLDTEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAMRCTDSSPDKRPSMEEVVEWLKDGVLKRKKDIPNLSNKGNEENDENYEEFVTMQSNNLKILSDNDGRKMR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01256 367 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01256 367 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 344 - -
Car04g01256 367 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Car04g01256 367 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01256 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Car04g01256 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Car04g01256 367 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Car04g01256 367 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01256 367 SUPERFAMILY Protein kinase-like (PK-like) 31 323 IPR011009 -
Car04g01256 367 PANTHER OS01G0253100 PROTEIN 5 344 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01256 Car-Chr4 12863116 12866238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01256 33 325 Receptor kinase-like Gene Family AT1G60800 44.595 3.51e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Car04g01256 Pkinase 8.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01256 - - gmx:100817283 616.69