Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01254 ATGTCTGGTCAACCCATAACCATTGATCCCTTTCTCCATCTTAATATCTCCTTAAATCCCAACGGCACCATCACTCGCTTACGTGATGACCCACACGTCTCACCTTCACTAAATCCCAACCTTTCAATCCCCGTTCTTACCAAACACGTTCCCATCAACCAATCACACAACACATCCGCTCGAATATTCCTACCCCGCAAACCACACGATCACTCCTCCTTCCACAAACTCCCTCTCATCGTTTACTTCCACGGTGGCGGTTTCATCTTCTTCAGTGCAGCCTCAGTTTTCCTTCACGATCTCTGTTTAAACCTTGCTAACGACGTCAACTCCATCGTCGTTTCGGTTGACTACCGTCTCGCTCCAGAACACCGATTGCCATCGGCGTACGATGATGCCGTGGAAGCGCTGCACTGGATCAAAAGACAATCAGATGATTGGTTGATAAATTACGCTGATTATTCCAATTGTTATATCATGGGAGGTAGCGCTGGAGCAAACATCGCATACCACGCGGGTCTACGTGTAGCCGCGGAGATTGATCTGAATCCTCTTAAAATAAGAGGACTTATTTTGTCCCAACCGTTTTTTGGTGGGACCCAGAGGGTACCCTCGGAGCTGAAGCTGATAAACGATGCCGTTTTGCCGCCAAACGCGTGTGATTTGATGTGGGAACTATCGTTGCCCGTTGGAGTTGACCGTGATCATGAGTATTGTAATCCAACGGCTGGAGATGGTCCTGGGGTTTTGGATCGGGTAGGGAAGCTGGGGTGGCGGGTGTTGGTGAGTGGGTGCGAGGGGGACCCACTAATGGACCATCAGATGGCACTGGCGAGGCTGATGGAGGAGAAAGGTGTGTCGGTAGTGAGCTGTTTTGTGGAAGGGGGTTATCATGGAGTTGAGGTTCGTGATCTCATCAGGCAAAAGCAATTGCACGACTTAATCAAAGATTTTATTTCTTTGTAA 966 0.4896 MSGQPITIDPFLHLNISLNPNGTITRLRDDPHVSPSLNPNLSIPVLTKHVPINQSHNTSARIFLPRKPHDHSSFHKLPLIVYFHGGGFIFFSAASVFLHDLCLNLANDVNSIVVSVDYRLAPEHRLPSAYDDAVEALHWIKRQSDDWLINYADYSNCYIMGGSAGANIAYHAGLRVAAEIDLNPLKIRGLILSQPFFGGTQRVPSELKLINDAVLPPNACDLMWELSLPVGVDRDHEYCNPTAGDGPGVLDRVGKLGWRVLVSGCEGDPLMDHQMALARLMEEKGVSVVSCFVEGGYHGVEVRDLIRQKQLHDLIKDFISL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01254 321 Pfam alpha/beta hydrolase fold 80 300 IPR013094 GO:0016787
Car04g01254 321 SUPERFAMILY alpha/beta-Hydrolases 20 319 IPR029058 -
Car04g01254 321 Gene3D alpha/beta hydrolase 11 320 IPR029058 -
Car04g01254 321 PANTHER ARYLACETAMIDE DEACETYLASE 5 319 - -
Car04g01254 321 PANTHER CARBOXYLESTERASE 120-RELATED 5 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01254 Car-Chr4 12857055 12858418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01254 16 315 Carbohydrate Esterase AT5G16080 34.295 3.52e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01254 - - gmx:100777786 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01377 08 21925750 21927040 Car04g01254 04 12857055 12858418 PCT
Car04g01254 04 12857055 12858418 Car08g01378 08 21935727 21937354 PCT