Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01247 ATGGGTAAGGAATGGTATTGGGGTGGAAAATCCATCTCCAAGAGAAATGGAGGAGGAAAAAGAGCTGAACCTGAAATCCCTTCTGGTTGCATGTGTACACTCTTTCAAGCCTTTGATTTTCATCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCTTTCAACTCTGTTTCTCACACACCAGATAACCACAATGTCCCAAAAGGAACTGAAGCACCTAGGAATAGCTTTGAATCAGAAGATGGTACTACAGCTTCATCATCCATTTCAAAAGAACAAAATTTAAAAATCCCAAAGAAGATGATGAGAATCAAAACAAGTGGAAGCACAAGAACAAAATCAGAAAGTTTCAATGATCTTTCATCTCCAGGGACAAAGACACCAACTTTGGTTGCAAGATTAATGGGtcttgatcttcttcctgattcacaatccacatcttcatcttcttcttcatctctctCCACACCAAACAAAAAAAGCCATTCTTCACATCATTCAAAGCAAAACATCAAGATAACAAAACACAGACACAGCACAGACAGTGTCATCCGTTCATTGCCTGAAACACCCTATGAAAAAAAATCAAATGTTGTTGAGCATAGACTGTCTCTACAAATCAACAAAGAAAACATAAGTGAGGATTTAGAGACTCCACGGTTTTCATTTTCAAAATGGAAATTTGATGAAAATAATAGCAGAAGTCCAAGTCACTATGCAAAGCAAATTGTTAAACAGGTAAAAGAAAGTGTTAGTAGAAGAAAAGTTGGTGTTGACATTACCAACACAGTCAAAAACAGAGAAAAATCAAAAGAAGATTTTGTTGAACAATTCAAATTGAAGAAAGTTCTTAAACCATTAGATGAATCAAACCAGGGAAAACACTCAAATGCATCTAACTCTCCAAGACTTAGTAGATTCAATGATACAAACCAGAAACATTCTTCTCCAAAAGACCAAATCCAAAACACACGCAAGGTACTAAAACAATCATCACCACCACCTGTAGTCAACATTGAAGCACAGGTTTCAAGAGTTTCAAAGACAAAGACTCAAGATTTGTCAGAGAAGGAGATGATGATGAAGGACAAAAAAACTTTCCCAAAATGCAAGAAAACACCACATGGGAATTTGAGTCCAAAGCTTAACAAAACTCCACAGACATCAATTAGAAACAAGCAAGAGGAATCATTCATTATGCGATCCACATCAACCACTAGAGCTAATGACATCAAAACCAAAACCAAAAGAACTCATCCACTTTCAACTAATCTCCTCAACAACAATGTTCCAAATCTTCTTCATGTCAAAACAGATCCTTCTCCTCCAGCTACAAAAATTCCTCAAAAACAGGTATGTGATAATTTCCAAGAAGTGAAAAAGGGGTCACAGTTATTTAGTTGTCCGCCCCAGAAGTCCAAACAAGAAGCCTCACACACACTCGTCAACGATGAATCAGAATCTAATGGTGGCTTCACCGGCACCGGAGACGACAACGAAGGACTAGAATATGAGTACATCACAACCATTCTAAGCCGTACAGGAATACACAGAGCAACATTACCTAACCTTCATTTTCAATGGTTCTCTTCTACTCACCCATTAGACCCTTCACTTTTTCACCGTCTTGAACTCTACCCAACAATTCCCAATAACCATAAAGATACAAACTTTACGAAAAAAAATCATTTGGGTCCTCGCTGTAATCGTAGATTACTGTTTGATTTGGTCGATGAAGTGTTGTATGAAATTCTCATTAAACCAAATTGTGAGCGAGGTTTATTGTTACTGGAGACAGTGTGGAAAAGAGCTCGGAGTTTTCCACGTGCGAAATGCAATGACTTAGATGACATTGATGGGTTGATAGAGATGAAAGATGTGATGGACAAAACTAaagaagaagaaaaagaaggagaaaagTTGGTGGCGGAAATTGAAGGAAAGATAATGGAGATGTTGGTGTATGAAACGTTAACCGTTATGGTTGGTGGCGTGTGA 2037 0.352 MGKEWYWGGKSISKRNGGGKRAEPEIPSGCMCTLFQAFDFHPXXXXXXXXXXXXXXXXXXXXXXXSFNSVSHTPDNHNVPKGTEAPRNSFESEDGTTASSSISKEQNLKIPKKMMRIKTSGSTRTKSESFNDLSSPGTKTPTLVARLMGLDLLPDSQSTSSSSSSSLSTPNKKSHSSHHSKQNIKITKHRHSTDSVIRSLPETPYEKKSNVVEHRLSLQINKENISEDLETPRFSFSKWKFDENNSRSPSHYAKQIVKQVKESVSRRKVGVDITNTVKNREKSKEDFVEQFKLKKVLKPLDESNQGKHSNASNSPRLSRFNDTNQKHSSPKDQIQNTRKVLKQSSPPPVVNIEAQVSRVSKTKTQDLSEKEMMMKDKKTFPKCKKTPHGNLSPKLNKTPQTSIRNKQEESFIMRSTSTTRANDIKTKTKRTHPLSTNLLNNNVPNLLHVKTDPSPPATKIPQKQVCDNFQEVKKGSQLFSCPPQKSKQEASHTLVNDESESNGGFTGTGDDNEGLEYEYITTILSRTGIHRATLPNLHFQWFSSTHPLDPSLFHRLELYPTIPNNHKDTNFTKKNHLGPRCNRRLLFDLVDEVLYEILIKPNCERGLLLLETVWKRARSFPRAKCNDLDDIDGLIEMKDVMDKTKEEEKEGEKLVAEIEGKIMEMLVYETLTVMVGGV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01247 678 MobiDBLite consensus disorder prediction 153 173 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 303 346 - -
Car04g01247 678 Pfam DUF761-associated sequence motif 132 158 IPR032795 -
Car04g01247 678 MobiDBLite consensus disorder prediction 299 346 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 477 511 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 58 194 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 477 508 - -
Car04g01247 678 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 678 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 118 141 - -
Car04g01247 678 MobiDBLite consensus disorder prediction 66 107 - -
Car04g01247 678 Pfam Domain of unknown function (DUF4378) 516 669 IPR025486 -
Car04g01247 678 PANTHER DUF4378 DOMAIN PROTEIN 1 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01247 Car-Chr4 12770657 12774069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01247 115 672 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.206 3.94e-48 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01247 - - cam:101515221 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01371 08 21648000 21651743 Car04g01247 04 12770657 12774069 PCT