Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01244 ATGGCTCTTCTGCCAACAGAAAACACTTTTCCAATCATTTTCCTCCTCTTAACAATATTTTCATTATCCAAAGCTGAACTTCATGCTCATTACTATGACCAAACATGTCCACAATTGGAAAAAATAGTTTCAGAGACGGTTCTTAATGCTTCTATCCATGATCCAAAGGTCCCAGCCCGTATTTTGAGGATGTTCTTCCATGACTGTTTCATAAAGggatgcgatgcatcaatattgctggactcaacggccactaaccaagcagagaaagatggacctcctaatatctcagttcaatcgttctatgtgattgatgatgctaaagcaaagcttgagttggcttgcccaggcactgtttcttgtgctgatatacttgctattacagcaagagatGTGGTGGCCATGTCTGGAGGTCCATATTGGAGTGTACTAAAAGGACGGAAAGACGGAAGGGTATCAAAGGCATCTGATACCATCAACTTACCAGCCCCAACCTTGAATGTAGACCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGACATGGTGACTTTATCTGGAGGACACACTCTGGGTTTCTCACATTGTTCTTCCTTTGAGGCTCGTGTTCATAATTTCAGTTCATTGCATGACATTGACCCAAGGATGAACACTAATTTTGCACTAGACCTAAAAAACAAATGTCCAAAACCAAACAACAACCGAAATGCAGGACAATTCCTGGACTCAACAGCATCAGTGTTTGATAATGACTATTACAAACAACTACTGGCTGGAAAAGAACAAGACGGATCGTTGAAGCATTTGCAAGAGACCAGAGTTTGTTCTTTAAAGAGTTTGCAGCTTCAATGTTGA 864 0.3229 MALLPTENTFPIIFLLLTIFSLSKAELHAHYYDQTCPQLEKIVSETVLNASIHDPKVPARILRMFFHDCFIKGCDASILLDSTATNQAEKDGPPNISVQSFYVIDDAKAKLELACPGTVSCADILAITARDVVAMSGGPYWSVLKGRKDGRVSKASDTINLPAPTLNVDQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFEARVHNFSSLHDIDPRMNTNFALDLKNKCPKPNNNRNAGQFLDSTASVFDNDYYKQLLAGKEQDGSLKHLQETRVCSLKSLQLQC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01244 287 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 Gene3D Peroxidase, domain 2 162 263 - -
Car04g01244 287 Gene3D - 30 161 - -
Car04g01244 287 PANTHER PEROXIDASE 25-RELATED 8 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 CDD secretory_peroxidase 26 263 IPR033905 GO:0004601|GO:0042744
Car04g01244 287 PANTHER PEROXIDASE 66 8 270 - -
Car04g01244 287 Pfam Peroxidase 49 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Car04g01244 287 SUPERFAMILY Heme-dependent peroxidases 27 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car04g01244 287 ProSiteProfiles Plant heme peroxidase family profile. 26 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01244 Car-Chr4 12748633 12750383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01244 10 272 Peroxidase AT5G51890 71.591 1.23e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01244 K00430 - gmx:100799516 460.299