Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01243 ATGGAAGGGAATCATACCCACGACGATGATTTCAGCGAAGAAAACGAAACACAAAGTACATCGGAGACAACAGAACCGCAAACGTTGAATACGCCGGAACCAACTTCGGTAATGAAAGAAGAGCTAACGGAAACGGAACGTCATGGCATCGACGAGTCACTTTCTGTTGGTGTTCTACCTATGCCGATGCCATTAACAGTATCGGcggcgaagaaaccgtcgaaagaccgtcatacgaaggtggaaggtcgtggccggagaatccgaatgccggcaacatgtgccgccagaatattccaactaacacgggagcttggtcacaaatccgacggagaaacaatacggtggttgctagaacaagctgaaccttccatcatagaagcaactggcaccggaacAGTTCCTGCCATCGCCGTTTCAGTCGGCGGCACGTTAAAGATTCCAACTTCATCACCGGCGAGACCAGACGGTGAAGAAGCTCCAAAGAAACGAAGGAGAAGAGCATCAAATAGTGAATTTATTGATGTGAATGAACAAGTTTCAATGTGTTCAGGGTTAGCACCAATTGCACAAACTGCATACGGCGGTGCTGCCGGTGGAAGTGGTGGTGGAATAGTCCCTTTATGGCCTGTGGTAAGTAGCGGTGGTTCAAATGCAACAGGACCATTTTTTATGTTCCCTAATTCAACTACGAATCAGCCACAATTTTGGGCTATTCCTGCGGCACCGTTTTTTAATGTTCAAAATAGACCCATTTCAGATTTTGTTTCTGCTATGCATATGCAACAACCTTTGAATGTTGCTTCGGCTTTTGGAAATACTAATTGTTCGTCTACTTTGGCTCCTAGTTTGAGCTCAGCAAAtactactacaactacttgttcttctgctgctacttcttcatcttcatctCAGATGCTAAGGGATTTCTCTTTGGAAATTTATGATAAGAAAGAGCTTCAATTTATGGATTCTTCTGCTTCAAATTTAGAACCACCCCCTACTTCAAATTAA 1014 0.3284 MEGNHTHDDDFSEENETQSTSETTEPQTLNTPEPTSVMKEELTETERHGIDESLSVGVLPMPMPLTVSAAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEEAPKKRRRRASNSEFIDVNEQVSMCSGLAPIAQTAYGGAAGGSGGGIVPLWPVVSSGGSNATGPFFMFPNSTTNQPQFWAIPAAPFFNVQNRPISDFVSAMHMQQPLNVASAFGNTNCSSTLAPSLSSANTTTTTCSSAATSSSSSQMLRDFSLEIYDKKELQFMDSSASNLEPPPTSN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01243 337 MobiDBLite consensus disorder prediction 1 51 - -
Car04g01243 337 MobiDBLite consensus disorder prediction 156 171 - -
Car04g01243 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 335 IPR005333 GO:0003700
Car04g01243 337 MobiDBLite consensus disorder prediction 146 171 - -
Car04g01243 337 MobiDBLite consensus disorder prediction 17 38 - -
Car04g01243 337 Pfam TCP family transcription factor 74 146 IPR017887 -
Car04g01243 337 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 7 335 - -
Car04g01243 337 ProSiteProfiles TCP domain profile. 74 128 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01243 Car-Chr4 12743217 12744612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01243 1 323 TCP Transcription Factor Family AT5G51910 46.921 2.44e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car04g01243 TCP 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01243 - - cam:101514016 603.594