Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01187 ATGAACTTCGCCGTGGCTTTCGCATTACTGTGTCTAATCACGGTGGAGCCATGGCGCGTTAACTCACAGGGGCTTCGGGTGGACATGACGCTCGTTCCAAAAGCACGTGATACCGGTGCTCTTTGTTTGGACGGGAGTTTACCTGCGTATCATTTGCACAGAGGATTTGGAACGGGACAAGACAATTGGCTTCTACAATTCGAGGGAGGTGGGTGGTGCAATGACTTGCGATCATGCTTGGAGAGAGCACAAACTCGCAGGGGTTCAACACGTTACATGACCAAGTTAGAGCCCTTCAATGGCATTTTAAGCAACAATGTACACCTTAATCCAGATTTTTACAATTGGAACCGGGTGAAGCTGAGGTATTGCGATGGAGCTTCATTTTCTGGAGACAGCGTTTACCATAATGGGACAACCACGCTGCACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGCCGACCTTCTACCAAAAGGATTGGGAAAGGCACGCAAGGTATACTTCACCAAGTATTTGCCAACAGATGCTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAAAGATGTCAGTCTCAACCACACTATGAGGTCCTTTTTCAAAGGCGTAGTTTCGTTGCAGGGGGTAGAGCAGAACCTGAACAGAAATTGCATCGCGGCGTTTAAGGACTTGTGCTTCTTTCCACAATATGCCTTGAAATATATAACAACACCATATTTTATCTTGAACAGTGCCTATGATATATACCAATTCCATAATATATTGGCGCCATCTTCAGCTGATCCCCATGGGATCTGGAACCGCTGCAAGCTGAACCTAGGGGCATGCACACCAGCCCAAATCAATACATTGCAAGGTTTTAGGATCGAAATGATTGAAGCTTTGAAACCCTTCTACTTATATTCGAACAAAGGGGGAATGTTCTTAAATTCATGTTTTGCTCATTGCCAAAGTGAATTGCAAGAAACATGGTTTGGACATGATTCTCCAAGAATAAAGAACAAGACTATTGCAGAAGCAGTTGGTGATTGCTCAGGTCACTTGGAATATCAGACTGGAATTTTGTCTACTAGCTCTCCTATCTGA 1101 0.4423 MNFAVAFALLCLITVEPWRVNSQGLRVDMTLVPKARDTGALCLDGSLPAYHLHRGFGTGQDNWLLQFEGGGWCNDLRSCLERAQTRRGSTRYMTKLEPFNGILSNNVHLNPDFYNWNRVKLRYCDGASFSGDSVYHNGTTTLHFKGQKIWEAIIADLLPKGLGKARKVYFTKYLPTDASVKCLSDAGFFLDGKDVSLNHTMRSFFKGVVSLQGVEQNLNRNCIAAFKDLCFFPQYALKYITTPYFILNSAYDIYQFHNILAPSSADPHGIWNRCKLNLGACTPAQINTLQGFRIEMIEALKPFYLYSNKGGMFLNSCFAHCQSELQETWFGHDSPRIKNKTIAEAVGDCSGHLEYQTGILSTSSPI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01187 366 PANTHER NOTUM-RELATED 21 348 IPR004963 GO:0016787
Car04g01187 366 Pfam Pectinacetylesterase 21 348 IPR004963 GO:0016787
Car04g01187 366 PANTHER PECTIN ACETYLESTERASE 9 21 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01187 Car-Chr4 12188542 12198066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01187 1 348 Carbohydrate Esterase AT5G23870 59.892 2.85e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01187 K19882 - gmx:100802358 558.91