Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01178 ATGCCTTCATGGTGGGGGAAATTATCATCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTATTTTTGACACATTGCACCGAAAATTTAGATTTCCATCTGAGGGTAAACTAAGCACTATATCAGGAGAATCACGTAGAcgatgcagtgacacaatttcagagaaaggggatcgttctccatctgaaTCAAGATCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTTCCGAAAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTGGATTCTGAAATTAGTATATCAGTGAAATCAAGACTTGAAAAGAGCTCCAAGCCGTCATTGTTTCTTCCTCTTCCAAAACCTGCATGCATACGTTGTGGACCAAGTCCTGCAGATTTGGATGGAGATTTGGTCACTAATTCAGTCTTCAGTGATTGCTCTGCCGATAGTGATGAGCCAGCAGACTCACGCAATCGTAGTCCTCTGGCAACTGACTCTGAAACCGGGACTAGAACTGCTGCTGGAAGTCCTTCCAGCTTGATGCTCAAGGATCAAACTTCTGCTGTTTCCCAACTGAATTCAAGAGAAGTCAAAAAACCGACAAACATTCTAAGTAATCACACGTCTTCTACTTCACCAAAACGGAGGCCTTTACGCAACCACGTACCAAATCTTCAGGTTCCTCCCCACGGTGTCTTTTATAGTGGTCCTGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGTACAGATCAGGTATTGAACTCTGCTTTTTGGGCCGGAAAGCCATATCCAGAGGTCAATTTCCTTGGATCTGGGCACTGCTCTAGTCCAGGTTCTGGTCACAACTCTGGGCATAATTCAATGGGAGGGGACATGTCGGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGGTACCGAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTCACACCTATTCATCCTCGAGCAGCAGGAACGCCAACTGAATCACAATCAGGATGGGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTCCCTCCTTTAACTGTTACCAATTCCTCGCTGTTTTCTCACTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGTTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACACGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTTCAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTATTGAGCCGTTTAAGGCATCCAAATATTGTGCAGTATTATGGCTCTGAAACAGTTGACGACAAGCTTTACATATACCTCGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTCGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTTCACAGGGACATCAAAGGAGCAAACATACTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATGTTATAAAAAACTCTAAGGGATGCAGCCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTCTCAATATGAAGGGGTTGCTGCTATGTTCAAAATTGGTAACAGCAAGGAGCTTCCAGCAATCCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAATTGAATTATTGGACCACCCTTTTGTAAAATCTGCTGGACCTTTGGAAAGACCTATTATGGTTCCTGAAGCTTCAGACACTATGTCTGGAATTACACACGGAACAAAAGCTCTGGGCATTGGACAAGGAAGAAATCCGTCTGCCTTGGATTCAGATAAACTCTCCGTTCATTCTTCTAGGGTTTTGAAAAGTAATCCTCATGAAAGTGAAATCCATATTTCAAGGAATATATCTTGCCCAGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAACAGAGAAGTGGAAGATTGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCGGGTGCATCCACGCCTCTCACTGGCGGCAGTGGTGCCATTCCATTCAGTAATAACCTAAAACAGTCAGTTTACTTTCAAGAATGTCTTGGAAGCATGCCGAAATCCTCAAACAGTGTCTACATTAACGGCTCCACTCATCACGACTCAAATATTGACATTTTTCGAGGAATGCAAATTGGGCCACACATTAAATCAGATCTTGTCTCCAGTGAAAATGATGTTCTCGGTAAGCAGTTTGTCAGGTCTCCTCATGTAGAGCCGTATGACTTTCAGTCAGTCTTGGCTGATCGTGTTGGCCGGCAGTTGCTCGGGGACCATGTTAAGATTAACCCTTCGTTCGATCCATGTCCCAGTCCGTCATTGCTCAACCGAACAAACGGTTTATGA 2640 0.4322 MPSWWGKLSSKETKKKASKESIFDTLHRKFRFPSEGKLSTISGESRRRCSDTISEKGDRSPSESRSPSPSKVARCQSFSERPHAQPLPLPGLHPSSVGRVDSEISISVKSRLEKSSKPSLFLPLPKPACIRCGPSPADLDGDLVTNSVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQTSAVSQLNSREVKKPTNILSNHTSSTSPKRRPLRNHVPNLQVPPHGVFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEVNFLGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAAGTPTESQSGWVDDGKQQSHRLPLPPLTVTNSSLFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTMFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHVIKNSKGCSLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPAIPDHLSNEGKDFVRKCLQRNPRDRPSAIELLDHPFVKSAGPLERPIMVPEASDTMSGITHGTKALGIGQGRNPSALDSDKLSVHSSRVLKSNPHESEIHISRNISCPVSPIGSPLLRSRSPQQRSGRLSPSPISSPRTASGASTPLTGGSGAIPFSNNLKQSVYFQECLGSMPKSSNSVYINGSTHHDSNIDIFRGMQIGPHIKSDLVSSENDVLGKQFVRSPHVEPYDFQSVLADRVGRQLLGDHVKINPSFDPCPSPSLLNRTNGL 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01178 879 MobiDBLite consensus disorder prediction 686 700 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 726 764 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 165 223 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 286 300 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 1 20 - -
Car04g01178 879 Gene3D Transferase(Phosphotransferase) domain 1 408 667 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 286 413 - -
Car04g01178 879 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 791 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 150 253 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 665 705 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 34 98 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 370 404 - -
Car04g01178 879 ProSiteProfiles Protein kinase domain profile. 411 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01178 879 MobiDBLite consensus disorder prediction 722 764 - -
Car04g01178 879 SUPERFAMILY Protein kinase-like (PK-like) 409 648 IPR011009 -
Car04g01178 879 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 791 - -
Car04g01178 879 MobiDBLite consensus disorder prediction 41 62 - -
Car04g01178 879 Pfam Protein tyrosine and serine/threonine kinase 566 641 IPR001245 GO:0004672|GO:0006468
Car04g01178 879 SMART serkin_6 411 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01178 879 MobiDBLite consensus disorder prediction 348 362 - -
Car04g01178 879 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Car04g01178 879 Pfam Protein kinase domain 412 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01178 Car-Chr4 12085673 12092641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01178 1 860 MAP Kinase Kinase Kinase AT1G63700 57.111 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car04g01178 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01178 K20717 - gmx:100797994 1434.47