Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01170 ATGGAGACACAAAAGCTTATCCCTTTAATAATCTTTCTCTTCTTTCTACCTTGTTCTGTTTCCTTTGTTCCTATAGATAACTATTTAATTAACTGTGGATCACACAGCAATGCTTCACTCTTCAATAGAGTCTTCATGGGTGATTCAACCAACCAAGGTTCCATTTTTCTCTCTTCAGATGATTCCATTTCTCTTATAAACAAAAACCCATCTCCAAATTTTCCAACTTTGTACCATACAGCAAGAGTTTTCACCAGCAATGGGAGATACAGGTTCCACATGAAGGAAAATGGTACCCATTTGGTTCGTTTTCACTTCTTTCCCTTTAAAGCTCAAAGCTTTGACATGAAATCTGCTAAATTTAGTGTCTTGGTTAATGGAATTTTGATTATAAAAGAGTTTAGGCCAATTAGTGATCATGTGCTGATCAAAGAGTTTATTTTGAAGATAGAATCAAACATGGTTGAAATTTTGTTTAGACCTGTTAATTCAGGTTTTGGATTTGTAAATGCTGTGGAAGTGTTTAATGCTCCTGTAGATTTTGTTATAGATTATGGAACTAGGTTGGTTGGTCCTTCTGGTGTGGAAGAGTACAAACACATTTCATCTAAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGAAAATAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAAGATTATTTGGTCTTTAAGGATGCAGCTAAACATGCAATTAGTACTCATACACCTAATTTTCAGAAGGGAGGTGCAACTCCAGAAATTGCGCCCGAAAACGTTTACATGACTGCTCAGCAGATGAATAGGGATAACTCAAGTTTAGCTTCAAGGTTCAACATAACATGGAATTTTCCCGTGGCTCGTGATGGTTTTCCGCATTTAATTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTCAATTTGCTTTACTTTGATGTGTATATCAATGGTTACATTGCATATAAGGATCTTGATTTATCAGCTCTTACAATCCACACTCTTGCATCACCTATCTATGTGGATTTTGTTGCTAATTCAGATGATTCGGGTGTTATTCAATTAAGTGTTGGTCCTTCTGACCTTAGCAGTTCAATAAGGATTAATGCTATATTGAATGGTGCTGAGATAATGAAGATGATCAACAATGTCGATGATAGTACTGTGCACAGGAGGAAACATTTGGAGGTGTTGTTTGGTTCAATTGTTGGAGGAATTGTTGTTTTATTTTTTGTAGCAACTGTTTTTCTACTTGCTATCAAATGCAGAAAGAAGAAACCAAAAGAAAGGACAGTGGAAAGTGTTGGATGGACACCTTTGAATGTGTTTGGAGGGAGTTCACTTAGTAGAACATCTGAACCTGGTTCTTATGGATATTTGGGTATGAAGATTCCTTTTGCTGAAATTCAATCAGCAACAAACAATTTTGATAGAAATTTGATTATTGGTTCTGGTGGATTTGGTATGGTATACAAAGGGGTACTCAGAGACAATGTTAAGGTCGCTGTCAAAAGAGGCGGTACGCCAGGTTCAAGACAAGGCCTTCCAGAATTCCACACAGAAATAACAGTTTTATCCAAAATTCGCCATCGACATCTTGTTTCATTAGTTGGTTTCTGTGAAGAAAATTCGGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCACTGAAAAAACATTTATATGGCTCATCGCGACAACTACCTTTATCTTGGAAGCAGCGGCTCGAGATATGCATTGGTGCGGCTAGAGGTCTACACTATCTTCACACTGGTTTCGCTCAAGGAATCATCCACCGCGACATTAAATCAACCAACATATTACTTGATGAAGATTATGTTGCCAAGGTTGCTGATTTCGGTCTTTCAAGATCAGGACCGTGCATCAATGAAACACATGTTAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAACAGCTTACTGATAAATCAGATGTGTATTCATTTGGTGTTGTGCTTTTTGAGGTTCTTTGTGGTAGACCTGCTGTTGATCCACAACTGACTAGGGAACAGGTGAATTTAGCAGAATGGGCTATTGAATGGCTGCAGAAGGGAATGTTGGAGCATATTGTTGATCCCCATCTTGTTGGAGACATTAAACCGAGGTCGTTGAAGAAATTCGGTGAAATGGCAGAGAAATGTTTGGCTGAGTATGGTGTTGATAGACCAAGTATGGGTGATGTGCTGTGGAATTTGGAATATGCACTTCAGCTTCAAGAAAGTGAACAACAAAGGGGTGTGCATGATGATTATGGTAGTGCTAGTGAAGAAGTTAATGAAACAACAAGAACTATTCATGAAAGTTCTACCAGCAGAAGAATAGAGAAAAATTATGATAATGAGGGTTCAGATATTAGTACTAGCCAAGTTTTTTCTCAGCTTATGAATAAAGAAGGCAGATAG 2475 0.3778 METQKLIPLIIFLFFLPCSVSFVPIDNYLINCGSHSNASLFNRVFMGDSTNQGSIFLSSDDSISLINKNPSPNFPTLYHTARVFTSNGRYRFHMKENGTHLVRFHFFPFKAQSFDMKSAKFSVLVNGILIIKEFRPISDHVLIKEFILKIESNMVEILFRPVNSGFGFVNAVEVFNAPVDFVIDYGTRLVGPSGVEEYKHISSKVLETIHRINVGGMKITPFNDTLWRTWIPDEDYLVFKDAAKHAISTHTPNFQKGGATPEIAPENVYMTAQQMNRDNSSLASRFNITWNFPVARDGFPHLIRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALTIHTLASPIYVDFVANSDDSGVIQLSVGPSDLSSSIRINAILNGAEIMKMINNVDDSTVHRRKHLEVLFGSIVGGIVVLFFVATVFLLAIKCRKKKPKERTVESVGWTPLNVFGGSSLSRTSEPGSYGYLGMKIPFAEIQSATNNFDRNLIIGSGGFGMVYKGVLRDNVKVAVKRGGTPGSRQGLPEFHTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQLPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWAIEWLQKGMLEHIVDPHLVGDIKPRSLKKFGEMAEKCLAEYGVDRPSMGDVLWNLEYALQLQESEQQRGVHDDYGSASEEVNETTRTIHESSTSRRIEKNYDNEGSDISTSQVFSQLMNKEGR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01170 824 Pfam Malectin-like domain 30 388 IPR024788 -
Car04g01170 824 SUPERFAMILY Protein kinase-like (PK-like) 460 757 IPR011009 -
Car04g01170 824 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 773 - -
Car04g01170 824 PANTHER OS07G0166700 PROTEIN 16 773 IPR045272 GO:0004714|GO:0006468
Car04g01170 824 Pfam Protein tyrosine and serine/threonine kinase 489 686 IPR001245 GO:0004672|GO:0006468
Car04g01170 824 SMART serkin_6 484 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01170 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Car04g01170 824 Gene3D Phosphorylase Kinase; domain 1 457 560 - -
Car04g01170 824 MobiDBLite consensus disorder prediction 767 824 - -
Car04g01170 824 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Car04g01170 824 MobiDBLite consensus disorder prediction 767 804 - -
Car04g01170 824 MobiDBLite consensus disorder prediction 805 824 - -
Car04g01170 824 Gene3D Transferase(Phosphotransferase) domain 1 561 783 - -
Car04g01170 824 CDD STKc_IRAK 490 757 - -
Car04g01170 824 Gene3D - 27 180 - -
Car04g01170 824 Gene3D - 205 390 - -
Car04g01170 824 ProSiteProfiles Protein kinase domain profile. 484 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01170 Car-Chr4 11986404 11989234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01170 2 824 Receptor kinase-like Gene Family AT3G46290 47.944 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car04g01170 Malectin_like 8.5e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01170 - - gmx:100801169 1319.29