Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01166 ATGACGTTAATTCTGTTATGCTTATTTCCTCTTTGCTTTCAACTTTTTTTCAATTTCGCACTTTCTCTCTCCTCCGATGGTCTCGCACTTCTGTCTCTTAAATTCGCCGTCGACCAATCCGAGGACGGCTTCTTCTCCGATTGGAACGGTGGCGATTCTAACCCGTGCGGTTGGTCGGGAATTTCCTGCGGTAACATCTCCGGTATTCCAGAGCCACGAGTTGTCGGAATTGCCCTCGCCGGAAAATCTCTCCGCGGCTATATTCCATCGGAGCTCGGCACGCTTCGCTACCTCCGTCGTCTTAATCTTCATGACAATGAATTCTACGGCGTTGTTCCAATGCAGCTCTTCAAAGCCACTGCACTTCACAGCATTTTTCTCCACCGTAACAACCTCTCCGGTCCGTTTCCACCCTCCGCATGCACCGTTCCGCGCCTCCAAAATCTCGATATTTCAGACAATTTCTTCTCCGGCAACATTCCTAACGATATCAAGAAATGTAAGCAGCTTCAACGGCTTCTCCTAGCAAGGAACAAATTCTCCGGAGAAATTCCGTCTGGCGTGTGGTCGGAGCTCGATAACCTAGTTCAACTCGACCTATCCGCTAACGATTTCAAAGGTTCAATCCCGGATGATATAGGCAACCTTGTTTCCCTCTCAGGCACATTGAACCTATCATTCAACCACCTCTCCGATCAAATTCCAAACTCACTCGGGAAATTGCCAGCCACCGTGAGCTTCGACCTCAGAAACAATAACCTCATCGGCGAGATTCCCCAAACGGGAACATTTTCAAACCAGGGCCCAACTGCATTCCTCGGTAACAAAGACCTGTGTGGATTTCCACTTCGAAAATCATGCACAGGTTCAAACCGAGACTCAGGTTCCAGTTCATCTTCTCACAAAGACGAACAGAGTAACCGCTCTAAAGGGCTCAACCCTGGTTTGATTATTGTGATCTCAGTAGCCGATGCTGTTGGAGTCGCTCTTATTGGACTTGTGATTGTCTATGTTTATTGGAAAAAGAAAGACAATGACAATGTGGGTAGTTGCAATAGGAAGAGAAGGTTTGGTGATGAGGATGAGGATGAGGATGAGAAAGGGAATGGTTGTTCTTTGCTTCCTTGTATTAGTGGTTTGAATTTGAAGAATGAGGAAGATAATGAAAATGGTGAGGTGGAGATAGATAAGGGAGGGAAAGGGGAAGGTGAATTGGTGACAATTGATAAAGGTTTGAAGATTGAACTTGATGAGCTATTGAGAGCCTCAACATATGTGTTGGGGAAGAGTGAATTGGGGATTGTGTATAAGGTGGTGCTTGGAAATGGGGGGCCAGTGGTTGTGAGGAGATTAGGAGAGGGTGGAGAAGAAAGGTATAAGGAGTTTGTAGCTGAAGTACAAGCCATTGGGAAGGTGAAGCATCCTAATATTGTGAGATTGAGAGCTTATTATTGGGCACATGATGAAAAGCTTCTTATAAGTGATTTCATCTCCAATGGCAATTTGGCACATGCACTTCGAGGTAGAAATGGCCAACCATCTTCAAACCTTTCATGGTCAACAAGGTTAAGAATTGCCAAAGGAATAGCAAGGGGCTTATCCTATCTTCATGAGTGCAGTCCTAGAAAATATGTACATGGTGACATAAAACCCTCAAATATCCTACTTGACAATGACTTACAACCCTACATTTCTGATTTTGGTCTTAATAGACTAATCAGCATCACAGGTAACAACCCTTCAACTGGTGGATTCATGGGTGGAGCTTTACCTTACATGAAATCATCATACAAAGAAAACAGAACCAATAACAACAATTACAAAGCGCCCGAGGCGCATGTACCTGGTTGTAGACCAACACAGAAATGGGATGTTTATTCATTAGGAGTTGTTATGCTTGAATTGTTAACAGGGAAGTCACCAGAATCATCTCCCATGTCGTTGTCGTTGTCGTCATCGGTTTCTGTGGTGGAAGGTTATGAGCTGGTAAGATGGGTGAGAAATGGGTTTGATCAACAAAGTCCTTTATCTGAAATGGTTGATCCATCTTTGTTACAAGAAGTGAGAGCTAAGAAAGAGGTATTGGCTGTGTTTCATGTTGCACTTGCTTGTACTGAAGGTGACCCTGAAGTTAGGCCTAGAATGAAAATTGTCTTTGAAAATCTTGAAAAGATTGGAAGGTAA 2184 0.4409 MTLILLCLFPLCFQLFFNFALSLSSDGLALLSLKFAVDQSEDGFFSDWNGGDSNPCGWSGISCGNISGIPEPRVVGIALAGKSLRGYIPSELGTLRYLRRLNLHDNEFYGVVPMQLFKATALHSIFLHRNNLSGPFPPSACTVPRLQNLDISDNFFSGNIPNDIKKCKQLQRLLLARNKFSGEIPSGVWSELDNLVQLDLSANDFKGSIPDDIGNLVSLSGTLNLSFNHLSDQIPNSLGKLPATVSFDLRNNNLIGEIPQTGTFSNQGPTAFLGNKDLCGFPLRKSCTGSNRDSGSSSSSHKDEQSNRSKGLNPGLIIVISVADAVGVALIGLVIVYVYWKKKDNDNVGSCNRKRRFGDEDEDEDEKGNGCSLLPCISGLNLKNEEDNENGEVEIDKGGKGEGELVTIDKGLKIELDELLRASTYVLGKSELGIVYKVVLGNGGPVVVRRLGEGGEERYKEFVAEVQAIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLAHALRGRNGQPSSNLSWSTRLRIAKGIARGLSYLHECSPRKYVHGDIKPSNILLDNDLQPYISDFGLNRLISITGNNPSTGGFMGGALPYMKSSYKENRTNNNNYKAPEAHVPGCRPTQKWDVYSLGVVMLELLTGKSPESSPMSLSLSSSVSVVEGYELVRWVRNGFDQQSPLSEMVDPSLLQEVRAKKEVLAVFHVALACTEGDPEVRPRMKIVFENLEKIGR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01166 727 PANTHER - 6 726 - -
Car04g01166 727 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 726 - -
Car04g01166 727 Gene3D Ribonuclease Inhibitor 22 190 IPR032675 -
Car04g01166 727 Gene3D Transferase(Phosphotransferase) domain 1 497 726 - -
Car04g01166 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Car04g01166 727 SUPERFAMILY L domain-like 29 284 - -
Car04g01166 727 SUPERFAMILY Protein kinase-like (PK-like) 426 722 IPR011009 -
Car04g01166 727 Pfam DNA binding protein S1FA 308 343 IPR006779 GO:0003677|GO:0005634|GO:0006355
Car04g01166 727 CDD STKc_IRAK 427 725 - -
Car04g01166 727 Pfam Protein kinase domain 426 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01166 727 Gene3D Phosphorylase Kinase; domain 1 413 496 - -
Car04g01166 727 MobiDBLite consensus disorder prediction 289 309 - -
Car04g01166 727 ProSiteProfiles Protein kinase domain profile. 421 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01166 727 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Car04g01166 727 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Car04g01166 727 SMART serkin_6 421 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01166 Car-Chr4 11861611 11869294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01166 20 725 Receptor kinase-like Gene Family AT1G67510 65.877 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car04g01166 Pkinase 6.8e-32 CL0016
TF S1Fa-like Car04g01166 Pkinase 6.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01166 - - gmx:100787556 1006.13