Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01158 ATGGAACACCATCCATCACCACTTCCACCAAAAACATACAAACTAACAGCAACTTCAATCTCTTACACCAAAAACTTACAAACAAACAACACCATCATTGCACCATTCCTCATCTTCAAACACTGTACACCAACTCCACCAACCTATATCCTCAAAGATGTTTCCCTCACTGCTTACCCTTCTGAAATCTTAGCCATTGTTGGTCCAAGTGGTGCAGGAAAATCAACCCTTTTAGACATTCTTTCAGCTAGAAGATTACCTTTAAGTGGAACACTTTCCCTTAACTCTTCACCTATAACAAACCCTTCAACATTCAGAAAACTCTCTGCTTATGTTCCTCAACATGATGCATGTCTACCTATGCTAACTGTTTCTGAAACTTTTGCTTTCTCTGCAAGTCTTCTTAAGCCTAAGAAAACAACTGATATAGCTTCCATTGTCTCTTCTCTTCTGAATGAACTAAGATTGACCCATTTGGCTAACACAAGGCTTGGTAATGGTTTATCAGGTGGAGAGCGTAGAAGGGTCTCTATTGGACTAAGTCTTCTTCATGATCCTGCTGTTTTGCTACTTGATGAACCAACTTCTGGTCTTGACAGTTCATCTGCTTTCAAAGTCATGCAAACTCTCAAATCATCTTGTGTTTCATATAACAGGACAATTGTTCTTTCTATTCATCAACCTAGCTTCAAGATTCTGTCTTGTATTGATAGAATTTTGTTGCTTTCAAAAGGGACTGTTGTTCATCATGGAAGCCTTGCTTCACTTCAAGCATTTTTGCACTCAAAAGGGTTCTCTGTCCCTCATCAGCTTAATGCTTTGGAATATGCTATGGAAATATTAAACCAATTGAATGAGCTTAAACCAATGATTACTCTTCCTACTCCACCTGAATCACCTGAAAGTAGTTCTAAATCTACTATAGGTTGTTCTGTATCTGACAATATTATTGGAACTAAAAGTAAAACAAGCAGAGAAATCAGGTACAAAAGTTCAAGGACTCATGAAATTTCTACACTTTTTAGAAGGTTTTGGAAGATTATTTACAGAACAAGACAACTTCTTTTAACAAACACAGCTGAAGCACTTGTAGTAGGACTTGTTTTAGGAACAATATACATCAACATTGGTTTTGACAAAGAAGGGATTCAGAAAAGCATTTTTTCTCTTCTCTGGCTATTTTATCTCCAAGGATTGTTTACCAAAATATTGGCTCTTCATGCACTTCTTTTCCATGTACAAATATGCTCTTGA 1254 0.3692 MEHHPSPLPPKTYKLTATSISYTKNLQTNNTIIAPFLIFKHCTPTPPTYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARRLPLSGTLSLNSSPITNPSTFRKLSAYVPQHDACLPMLTVSETFAFSASLLKPKKTTDIASIVSSLLNELRLTHLANTRLGNGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSAFKVMQTLKSSCVSYNRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSKGFSVPHQLNALEYAMEILNQLNELKPMITLPTPPESPESSSKSTIGCSVSDNIIGTKSKTSREIRYKSSRTHEISTLFRRFWKIIYRTRQLLLTNTAEALVVGLVLGTIYINIGFDKEGIQKSIFSLLWLFYLQGLFTKILALHALLFHVQICS 417
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g01158 417 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524
Car04g01158 417 Gene3D - 39 289 IPR027417 -
Car04g01158 417 Pfam ABC-2 type transporter 226 286 IPR043926 GO:0140359
Car04g01158 417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 269 IPR003439 GO:0005524
Car04g01158 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 259 IPR027417 -
Car04g01158 417 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 387 - -
Car04g01158 417 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 387 - -
Car04g01158 417 Pfam ABC transporter 51 196 IPR003439 GO:0005524
Car04g01158 417 SMART AAA_5 60 246 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car04g01158 Car-Chr4 11817382 11818994 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01158 46 263 Calmodulin-binding Proteins AT2G36910 29.412 9.30e-20 90.1