Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01151 ATGGAACAGAAACATGTTTTTTTGTCAGCAttgagtgttggagttggtttgggtgttgggttgggaagatgggttggggttggtggttATCCTATTCCTAATTCTAATGAGATTTCTGAGGAACAGATTGTGAGGGAGCTCATGAACCTTGTCATTGATGGCAAAGATAGTGAAATCACATTTGATGAGtttccttattacttaagTGATAAAATCGAAATTTTGTTGACAAGTGCTGGATTTGTTCATTTAAGACAATTTCACTTATCCATGCATGCGAAAAAACTTTCGCCAATAAGCCGAGCTATTTTGCTTTCTGGACCTGCAGAACTTTATCAGCAAAATCTTGCTAGAGCTTTAGCACATTGCTTTGATTCGAAGTTACTCTTGCTAGATTTTACTGACTTCTCTTTGAAGATGCAGAACAAATATGGTTGTCCTGGAAAAGAACCGGATTTAAAAAGGTCCATATCTGAGGTGACTCTGGAGAAAGTGTCTTCTTTATTTGGTTCCCTATCAATCCTCCCTTTAATGGGCGCAATTAGAGGTACTCAATTAGAACAAAGTAGTGCAATTGGAAATTCCATTAATCCTCCAAAGCTTCAAAAGAAAGCCCCTACTACACCTGATATGGGTCCTACTAGTCAATCTGGTCCATCACATCCAGCTCCTTTGAAGTGCACAAACCGCTTCTGTTTTGATGAAAAGCTTTTCCTACATTCACTCTACGAGGTCTTGGTTTCTATATCACAATCTGGTTCTGTTATTTTATACATCAAGGATGTTGATAAGATTTTTCTTCAATCACCAAGGATGTACACTTTGTTCCAAAAGCTATTAAAGAAACTTTCAGGATCAGTGCTAATACTCGGTTCCCAGATTTATGATTCAGAAAATAATTGTATGGAAGTTGATGAAAAACTCACTACATTATTTCCTTACTACATTGAGATCAAACCACCTCAAGATGAGGCTCTTCTCAAGATCTGGAAAGACGAAGTAGAAGAGGCCATGCAAGAGACTCAGTTGAAAGATAACAGAAACCACATTGCTGAAGTGCTTGCATCCAATGACATCGACTGCAATGACTGGAACTCAATCAGTGATCCCGACATTATGCTACTCAGTAATTATATCGACGAGTTTGCAGCATCTGCAATTTTTTATCACTTGGTGGATTTCGAACATCCAGAATACCGAAATGGAAAGCTAATTATATCTGCCATGAGATTGTGCCAGTTAGTAAAACTGTTACAGGAGAGTGAAAGTGGTGAAAGAAGTGAGAAGGATGATAAGAAGGATGGTGCCAAAAAACATATACCGATACCAAAAGGGACAAAGAAAGACAGTGATATTAAAGATCCGGAAAAAGAAGCTGAAGTTCCTTCTTACAATGAGTTTGAGAAGCGCATAAGAAAAGAGGTTATCCGTGCAAATAAGATAGGCGTGACATTTTCAGATATTGGTGCATTGGATGATGTTAAAGAAACACTTCAAGAAGTGGTTATGCTTCCCCTTAGAAGACCAGATATATTCAAAGGTAGCCTTCTGAAGCCTTGTAGAGGTGTATTGCTTTTCGGGCCACCTGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGACGCTGGAGCAAGTTTCATTAATGTCTCAATGTCCACCCTCACTTCAAAACTGTATGGGGAAGACGAAAAGAATGTCCGAGCTTTGTTTTCACTAGCTGCAAAGGTTGCACCAACTATTATTTTCATTGATGAAGTTGATAGCATGCTTGGGAAGCGGTCTGAAAGTTATGAGCACGAGGCTACGAGAAGGATTAAGAATGAATTTATGTCCCATTGGGATGGACTATTGTCAAAACATGATGAGCGAATTCTTGTTCTTGCTGCCACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAACGCAGGATCATGGTTGGTCTTCCTTCAGCTGAAAGCAGGGAAAGGATCTTGAAAACTGTTCTAGCTAACGAAAATCATGAAAATATAGACTTCAAAGAGCTTTCAACTATGACAGATGGATATAGTGGAAGTGATCTCAAGAACTTGTGCATGACTGCAGCCTATCGCCCCGTTGCGGAGCTAATACAACAGGAGAAGGAAAAAGATATGAAAAGGAAAGAAGAAGCTCAAACTTCAGAAGATGCTTCCAATGCAACAGAAGATAAAGAAGATCAAGTAATTGCTCTTAGGCCTTTAAACATGGAAGACATGAGAGTGGCAAAGAATAAGGTGGGTGCAAGTTATGCTGAAGGAGCATTGATGAACCAGTTGAAGCAGTGGAATGAATTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGCAGCTCACTTATTTTCTTTAG 2382 0.3799 MEQKHVFLSALSVGVGLGVGLGRWVGVGGYPIPNSNEISEEQIVRELMNLVIDGKDSEITFDEFPYYLSDKIEILLTSAGFVHLRQFHLSMHAKKLSPISRAILLSGPAELYQQNLARALAHCFDSKLLLLDFTDFSLKMQNKYGCPGKEPDLKRSISEVTLEKVSSLFGSLSILPLMGAIRGTQLEQSSAIGNSINPPKLQKKAPTTPDMGPTSQSGPSHPAPLKCTNRFCFDEKLFLHSLYEVLVSISQSGSVILYIKDVDKIFLQSPRMYTLFQKLLKKLSGSVLILGSQIYDSENNCMEVDEKLTTLFPYYIEIKPPQDEALLKIWKDEVEEAMQETQLKDNRNHIAEVLASNDIDCNDWNSISDPDIMLLSNYIDEFAASAIFYHLVDFEHPEYRNGKLIISAMRLCQLVKLLQESESGERSEKDDKKDGAKKHIPIPKGTKKDSDIKDPEKEAEVPSYNEFEKRIRKEVIRANKIGVTFSDIGALDDVKETLQEVVMLPLRRPDIFKGSLLKPCRGVLLFGPPGTGKTMLAKAIANDAGASFINVSMSTLTSKLYGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGKRSESYEHEATRRIKNEFMSHWDGLLSKHDERILVLAATNRPFDLDEAIIRRFQRRIMVGLPSAESRERILKTVLANENHENIDFKELSTMTDGYSGSDLKNLCMTAAYRPVAELIQQEKEKDMKRKEEAQTSEDASNATEDKEDQVIALRPLNMEDMRVAKNKVGASYAEGALMNQLKQWNELYGEGGSRKKEQLTYFL 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01151 793 MobiDBLite consensus disorder prediction 713 740 - -
Car04g01151 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 703 IPR027417 -
Car04g01151 793 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 793 - -
Car04g01151 793 SMART AAA_5 519 656 IPR003593 -
Car04g01151 793 Gene3D - 655 735 - -
Car04g01151 793 Pfam AAA+ lid domain 675 718 IPR041569 -
Car04g01151 793 MobiDBLite consensus disorder prediction 422 459 - -
Car04g01151 793 CDD AAA 521 654 - -
Car04g01151 793 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 793 - -
Car04g01151 793 ProSitePatterns AAA-protein family signature. 626 645 IPR003960 GO:0005524|GO:0016887
Car04g01151 793 Pfam ATPase family associated with various cellular activities (AAA) 523 653 IPR003959 GO:0005524|GO:0016887
Car04g01151 793 Gene3D - 483 654 IPR027417 -
Car04g01151 793 MobiDBLite consensus disorder prediction 196 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01151 Car-Chr4 11753444 11758692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01151 517 727 Calmodulin-binding Proteins AT3G56690 34.884 1.29e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01151 - - cam:101505986 1528.07