Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01148 ATGGCAAGTGCTACTTCGTCATTTACGTGTTATTGGATTGTTGTTACTTTGTTCCTAGGTTGTTTTTGTAGCTGCATTTCGAGCCAGATTGGATTGGGCTCAAGATTATTGGCTAGTAAGGACCAAGTTTGGGTTTCTGATAATGGCACATTTGCTATGGGATTCACTCCATCATATACTGATAATCGATTGTTCACTTTGGGCATTTGGTTTGCTAGGCTTCCAGGAAATCGAACTTTAGTTTGGTCACCCAATAGTGACTCTCCTATATCTAAAGATGCAATTTTGGAGCTTGACACCACAGGCAACCTCGTACTAATGGACAAAGACATCACCATATGGTCCTCAAACACCTCAGGTGTGAATGTAGAATCAGCAATCATGTCAGAATCTGGAAACTTCATCCTTCACAACACAAACAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCTGACACACTCCTTCCAAATCAGCCTCTAACAGTTTCTTCACAATTAACATCATCCAAATCTTCCTCTAATGGTGGCAGCTACTATGCTCTCAAAATGCTTCAACAACCAACTTCCTTAAGCCTTGCACTAACTTACAATCTTCCAGAAAGTTACCAACTTTATGAATCATCATACACAAACTATTCCTATTGGAAAGGTCCTGATATATCAAATGTAACCGGCGAAGTTATTGCAGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGAGTCTTCTGATGGTGCAGTTTATGTGTATAAGAATGATAATGATGATGCAGGTTTGGCTTCTGCAATTCATCAGTCTACACCATTAACTGTTCTTAGGAGACTGACACTTGAAGATAATGGAAATTTGCGGTTATACCGATGGGAAGACGTAAACGGGTCGAAACAATGGGTGTCACAATGGGCTGCAGTTTCAAATCCATGTGATATTGGTGGCATTTGTGGCAATGGTGTTTGTAAATTGGATAGAACTAAGACAAAAGCCTCTTGCACTTGCTTACCAGGAACTTCTAAAGTTGGAATAGATGGTCAAAGCCAATGCTATGAGAATTCATCTTTAGTTGGAAAATGCAATGGACAACATGAAAACCAAACATCATCATCACATGATGTTTCTTCTGTATCGAAATGCGGAGATGCGTGCTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGTTTAAATGAGGAGAAACCATTTTGTTGGGTGTTGAAAAATTTAAGTTTTGGTGGTTTTGAGGATACAAGCTCTACATTATTTGTGAAGGTAAGAGCAAATAGTTCATGGATACCAGAAGGTCAAGAAGGAAGGTCTAATAACAGTTCTTCTGATGGAATGGGGAGTGTTAAGGAGAAAGCTGTGATTATTCCAATTGTTTTAAGCATGATAGTTTTAATTTTTTTACTATGTATGTTACTGTATTATAGCGTTCATAGAAAAAGAACTTTGAAAAGAGAGATGGAAAGTTCCTTGGTTTTATCAGGTGCTCCGATGAATTTTACTTACCGCGCGATGCAAATCAGGACAAGCAACTTTTCACAGCTTCTAGGAACTGGTGGATTTGGAAGTGTGTATAAAGGAAGCCTTGGCGATGGTACCCTAGTGGCAGTGAAGAAACTTGATAAGATTTTGCCTCATGGGGAGAAAGAATTTATCACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGTTCTGAGGGACCACACAGGCTTCTGGTTTATGAGTACATGAAGAATGGTTCGTTGGACAAATGGATCTTCCCTTCGTATCGAGGGCTAGATAGATTGCTAGATTGGCAAACTCGCTTTGATATATCGATAAATACTGCACAagggattgcatactttcatgagcagtgcagaaatcggataatacactgcgacatcaaaccagaaaatatattgttagatgaaaacttttgtcctaaagtatctgattttggacttgccaaattgatggctagggaacactctcatgtggtaacaatgattagaggcactagaggttatttggcgccagaatgggttagtaatcgacctataactgtaaaagcagatgtttacagctatggtatgcttcttttagaaatcatTGGTGGTAGGCGAAATCTTGACTTGTCCTATGATGCAGAAGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGATCGCCTGCAATAAAAGTGGCAGATAGAAGATTAAATGGAGCAGTTGATGAAGAAGAGCTATTaagagctttgaaagttgcattttggtgcatccaagatgatgtatccatgcgaccaccaatgggagaagtagtgagaatgcttgaaggtcaaggttcaaatatcataaatatgccaccaatgccacaaacagtactagaGTTAGTTGAAGAAGGTTTGGACCATGTCTACAAAGCCATGAAAAGAGAGTATAACCAGTTCAGCTCATTCACCATTACCAGCCATCTTACATCTCATGCCACATGTAGCAATACCACAATGTCACCAAGATAG 2547 0.3341 MASATSSFTCYWIVVTLFLGCFCSCISSQIGLGSRLLASKDQVWVSDNGTFAMGFTPSYTDNRLFTLGIWFARLPGNRTLVWSPNSDSPISKDAILELDTTGNLVLMDKDITIWSSNTSGVNVESAIMSESGNFILHNTNNHPVWQSFSQPSDTLLPNQPLTVSSQLTSSKSSSNGGSYYALKMLQQPTSLSLALTYNLPESYQLYESSYTNYSYWKGPDISNVTGEVIAVLDQAGSFGIVYGESSDGAVYVYKNDNDDAGLASAIHQSTPLTVLRRLTLEDNGNLRLYRWEDVNGSKQWVSQWAAVSNPCDIGGICGNGVCKLDRTKTKASCTCLPGTSKVGIDGQSQCYENSSLVGKCNGQHENQTSSSHDVSSVSKCGDACLSDCDCVASVYGLNEEKPFCWVLKNLSFGGFEDTSSTLFVKVRANSSWIPEGQEGRSNNSSSDGMGSVKEKAVIIPIVLSMIVLIFLLCMLLYYSVHRKRTLKREMESSLVLSGAPMNFTYRAMQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGPHRLLVYEYMKNGSLDKWIFPSYRGLDRLLDWQTRFDISINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDLSYDAEDFFYPGWAYKEMTNGSPAIKVADRRLNGAVDEEELLRALKVAFWCIQDDVSMRPPMGEVVRMLEGQGSNIINMPPMPQTVLELVEEGLDHVYKAMKREYNQFSSFTITSHLTSHATCSNTTMSPR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01148 848 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Car04g01148 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 10 848 - -
Car04g01148 848 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Car04g01148 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Car04g01148 848 Gene3D Transferase(Phosphotransferase) domain 1 589 796 - -
Car04g01148 848 ProSiteProfiles Protein kinase domain profile. 513 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01148 848 Gene3D - 26 150 IPR036426 -
Car04g01148 848 PIRSF SRK 1 838 IPR024171 GO:0004674
Car04g01148 848 SMART serkin_6 513 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01148 848 PANTHER OS07G0415500 PROTEIN 10 848 - -
Car04g01148 848 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Car04g01148 848 SUPERFAMILY Protein kinase-like (PK-like) 491 787 IPR011009 -
Car04g01148 848 Pfam D-mannose binding lectin 79 166 IPR001480 -
Car04g01148 848 SMART blect_4 35 151 IPR001480 -
Car04g01148 848 Pfam Protein kinase domain 516 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01148 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 153 IPR036426 -
Car04g01148 848 CDD STKc_IRAK 519 788 - -
Car04g01148 848 Pfam S-locus glycoprotein domain 257 338 IPR000858 GO:0048544
Car04g01148 848 CDD B_lectin 39 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01148 Car-Chr4 11730618 11734686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01148 484 798 Receptor kinase-like Gene Family AT5G20050 44.681 5.23e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car04g01148 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01148 - - gmx:100794281 1430.23