Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01141 ATGACTGGATTTTGGAGTGTGTTTTGTGGGGAATCTGATTGTTCAAAGCAGTGCAGTTTTGATGTTAAGTTTCTCATTGATCCTTCCACATGTATCAACCATTTGTTGATATCTTGCTTTGATTTATTGCTTCTCATCATGCTCCTATCTGTAGTGATCCAAAAGTCATCATTAAAACCATATCAGGGTCTTATACACAGGCAAAGATATTCAAATCTGCAACTAGTTTCTGCCATAACCAATAGTGCTCTTGGCTTGGTGCATTTATTCTTCGGCATTTGGATTTTAGAGGAGAAGTTGAGGAAAAATAAAACTGCATTGCCTCTTGATTTGTGGTTGCTAGAATTTATTCAAGGACTAACATGGCTGTTAGTTGGTTTATCATTAAGCCTTAAGTTTAAACAACTTCCAAGAACATGGTTAAAGCTTTTTTCTGTTCTAATATTCTTGGTTTCTGGTTTAAACTGTGGTTTATCCTTGTTTTATGCAATCAATAGCATACAACTTTCACTCAAGGTAGCATTAGATGTTCTATCTTTTCCGGGCGCAATTTTATTACTATTATGCACATACAAGTATAAGGACACTGACCGAGAAATCGATGAAAGCCTTTACACACCTTTAAATGGTGAGTCAAATAAAAATGATTCTGTTAGCCATGTAACTCTATTTGCCAAAGCTGGATTCTTCAGTAGGATGTCATTTCAGTGGCTGAATCCATTGATGAAGAGCGGGAAAGAGAAAACACTTGAGGATGAAGATGTTCCAAAGTTGAGGGAGGAAGATAGAGCAGAAAGTTGTTATTCGCTGTTTCTAGACCAATTAAACAAGCAGAAAAAGAAGGATCCATCTTCACAACCATCTGTTTTGTTGACATTATTTTTATGTCACTGGAGAGAAATTCTGATATCTGGATTCTTTGCATTGCTCAAGGTACTTGCACTGTCTTCTGGACCCATGCTTCTTAATTCCTTTATATTAGTTGCTGAAGGCCATGAGAGTTTCAAATATGAAGGTTTTGTATTGGCCGTAGTACTTTTCTTTATAAAAATTATAGAATCTCTATCACAAAGGCAATGGTACTTTCGCTCGAGACTCGTCGGTCTTAAAGTTCGTTCACTGTTAACTGCAGCAGTTTATAAAAAGCAACTGAGGTTATCCAATTCAGCTAGATTGGTGCACTCTAGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTTCCTTATTGGTTTCACCAAACATGGACAACTAGCTTCCAACTGTGTATCTCATTAGTAATACTTTTCAATGCTGTTGGGCTAGCTACAATTGCTTCCTTGGTAGTGATAGTTATCACAGTACTTTGCAATACACCCCTTGCAAAGTTGCAACATAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTACTTCTGAGGCTCTTGTCAATATGAAGGTGCTGAAGTTGTATGCTTGGGAAACAAGCTTTAAGAATTCTATTGAAAGATTAAGGAATGAGGAGATGAAATGGTTGTCTGCAGTGCAATTGAGAAAGGCATACAATACCTTTCTCTTTTGGTCCTCACCAGTTTTAGTCTCTGCTGCTTCATTTGGAGCGTGTTACTTTCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTTGCGACTTTGCGCCTTGTTCAAGATCCGATTAGAACCATCCCTGATGTTATTGGGGTAGTCATTCAGGCGAAAGTTGCATTCGCCCGGATTCTAAAATTTTTGGAGGCAGCTGAGCTGCAGAGTGAAAATGTTAGGAAAAAAGGTTCTGATGGCAATATGAAGGGCTCAATTTCAATAAAATCTGCTGATTTTGCATGGGAAGATAATAATGTATCGAAACCAACATTGAGAAACATAAATTTGGAAGTTAGATCTGGACAAAAGGTGGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCCACTCTCTTGGCAGCAATTCTCAGAGAAGTTCCTAACACTCAAGGAAAAATTGATGTGTATGGAAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTACAGTAAGGGATAATATATTGTTTGGATCAACTATGGATGCTCAAAAATATCAGGAAACTCTTCACAGGTCTTCACTAGTGAAAGACCTTGAGTTGTTTCCCCATGGTGATCTCACTGAAATAGGAGAGAGAGGGGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCCCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTCGATGCACAAACTGCCACAAATTTGTTTAATGAATACATTATGGAAGGGCTTGCTGGGAAGACAATCTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTTTCTTTTGTTGATGTCAGATGGAGAGATCATACAAGCTGCCCCTTATCATCAATTGTTAACTACAAGCAAAGAATTTCAGGAACTTGTGAATGCTCACAAAGAAACCGCTGGTTCTGACCGGCTTGTGGATGTTACTTCTTCTGCAAGACATTCGAATCCTGCTAAAGAGATTAGAAAAACATATGTGGAGAAAGAACAGCAATATGAAGCACCGAAAGGTGATCAATTGATTAAACAAGAAGAGAGAGAGATAGGAGATCAAGGGTTTAAGCCTTACTTACAGTATCTGAATCAGAACAGAGGATATGTATACTTCTCAGTGGCTTCTGTTTCTCACCTTATATTTGTGATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCTAAAGTCAGCACTTTGAGATTGATTCTAGTTTACTTATTGATTGGAGTTACTTCAACAGTGTTCTTATTGATGAGAAGTCTTTTCACAGTTGCTTTGGGTCTTCAATCTTCAAAGTCTTTATTTTTACGGCTACTGAACTCATTATTTCGCGCACCGATGTCGTTTTATGATTCTACGCCTTTGGGACGAATACTTAGTAGGGTCTCTTCTGATCTCAGCATTGTTGATCTTGATGTTCCATTTGGCCTTCTTTTCACTGTGGGAGCTACGACGAATTGCTATGCAAGTCTAACTGTTTTAGCAGTGGTTACTTGGCAAGTCTTGTTTGTCTCTATACCGATGGTTTATTTTGCGCTGCGCTTACAGAAATATTACTTTGCTTCGGCAAAAGAACTAATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAACCATCTAGCAGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAAGAGGAAGACCGCTTTTTTGTGAAGAACCTTGATCTAATTGATATCAATGGTACTCCTTTCTTCCATAGTTTTGCTGCAAATGAATGGTTGATTCAACGGTTGGAAACAGTTAGTGCTGTTGTTCTTGCGTCTGCTGCACTTTGCATGGTTATACTTCCACCTGGCACTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGGTCTTTCATTAAACGCTTCCTTAGTGTTTTCAATTCAAAATCAATGCAATATAGCAAATTACATAATATCAGTGGAGAGGCTAAATCAATATATGCACGTAAAAAGTGAGGCACCAGAAGTAATAGAAGGAAATCGTCCTCCGGTGAATTGGCCAATTGTTGGAAAAGTAGAAATAAAGGAACTACAGATACGGTACAGGCCTGATGCACCACTAGTACTCCGTGGGATCACATGTACCTTTGAAGGAGGACACAAAATTGGTATTGTTGGCCGGACAGGCAGCGGCAAGACCACTCTAATTGGCGCTTTATTTCGTCTAGTAGAGCCAGAAGGTGGAAAAATCATTGTTGATGGCATTGACATTTCTTCCATTGGACTTCATGATTTGAGGTCACGTTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGAACAGTTAGATACAATTTGGACCCTTTATCTCAACATTCTGATCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAGTTGCAAGAGGCTGTTCAAGAGAAAGAAGGTGGCTTAGACTCCTCAGTTGTTGAAGACGGGGCGAATTGGAGCATGGGACAACGGCAGTTATTCTGTTTAGGACGAGCTCTTCTAAGGAGAAGCCGGGTATTGGTGTTGGACGAAGCAACTGCATCAATTGATAATGCAACTGACTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACGGTAATCACGGTAGCTCATAGGATACCAACTGTGATGGATTGCACTAAAGTTCTAGCCATCAGTGATGGAAAATTGGTAGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCTTTGTTTGGGAAGCTTGTTAAAGAATATTGGTCTCATTTTCAGTCTGCAGAGTCTCATTAA 4428 0.3918 MTGFWSVFCGESDCSKQCSFDVKFLIDPSTCINHLLISCFDLLLLIMLLSVVIQKSSLKPYQGLIHRQRYSNLQLVSAITNSALGLVHLFFGIWILEEKLRKNKTALPLDLWLLEFIQGLTWLLVGLSLSLKFKQLPRTWLKLFSVLIFLVSGLNCGLSLFYAINSIQLSLKVALDVLSFPGAILLLLCTYKYKDTDREIDESLYTPLNGESNKNDSVSHVTLFAKAGFFSRMSFQWLNPLMKSGKEKTLEDEDVPKLREEDRAESCYSLFLDQLNKQKKKDPSSQPSVLLTLFLCHWREILISGFFALLKVLALSSGPMLLNSFILVAEGHESFKYEGFVLAVVLFFIKIIESLSQRQWYFRSRLVGLKVRSLLTAAVYKKQLRLSNSARLVHSSGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFNAVGLATIASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLKATSEALVNMKVLKLYAWETSFKNSIERLRNEEMKWLSAVQLRKAYNTFLFWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARILKFLEAAELQSENVRKKGSDGNMKGSISIKSADFAWEDNNVSKPTLRNINLEVRSGQKVAICGEVGSGKSTLLAAILREVPNTQGKIDVYGKFAYVSQTAWIQTGTVRDNILFGSTMDAQKYQETLHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATNLFNEYIMEGLAGKTILLVTHQVDFLPAFDFLLLMSDGEIIQAAPYHQLLTTSKEFQELVNAHKETAGSDRLVDVTSSARHSNPAKEIRKTYVEKEQQYEAPKGDQLIKQEEREIGDQGFKPYLQYLNQNRGYVYFSVASVSHLIFVIGQILQNSWMAANVDNPKVSTLRLILVYLLIGVTSTVFLLMRSLFTVALGLQSSKSLFLRLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLLFTVGATTNCYASLTVLAVVTWQVLFVSIPMVYFALRLQKYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFVKNLDLIDINGTPFFHSFAANEWLIQRLETVSAVVLASAALCMVILPPGTFSSGFIGMALSYGLSLNASLVFSIQNQCNIANYIISVERLNQYMHVKSEAPEVIEGNRPPVNWPIVGKVEIKELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPEGGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAESH 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01141 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01141 1475 SUPERFAMILY ABC transporter transmembrane region 914 1212 IPR036640 GO:0005524|GO:0016021
Car04g01141 1475 Pfam ABC transporter 1246 1394 IPR003439 GO:0005524
Car04g01141 1475 Pfam ABC transporter 636 770 IPR003439 GO:0005524
Car04g01141 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 841 IPR027417 -
Car04g01141 1475 Gene3D - 612 847 IPR027417 -
Car04g01141 1475 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524
Car04g01141 1475 CDD ABC_6TM_ABCC_D2 911 1204 IPR044726 GO:0140359
Car04g01141 1475 SUPERFAMILY ABC transporter transmembrane region 290 590 IPR036640 GO:0005524|GO:0016021
Car04g01141 1475 Pfam ABC transporter transmembrane region 302 567 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01141 1475 Pfam ABC transporter transmembrane region 916 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01141 1475 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1475 - -
Car04g01141 1475 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1475 - -
Car04g01141 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1463 IPR003439 GO:0005524
Car04g01141 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1456 IPR027417 -
Car04g01141 1475 SMART AAA_5 1255 1447 IPR003593 -
Car04g01141 1475 SMART AAA_5 645 818 IPR003593 -
Car04g01141 1475 CDD ABC_6TM_ABCC_D1 303 590 IPR044746 GO:0140359
Car04g01141 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 302 582 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01141 1475 CDD ABCC_MRP_domain1 617 818 - -
Car04g01141 1475 CDD ABCC_MRP_domain2 1227 1447 - -
Car04g01141 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 841 IPR003439 GO:0005524
Car04g01141 1475 Gene3D ABC transporter type 1, transmembrane domain 878 1210 IPR036640 GO:0005524|GO:0016021
Car04g01141 1475 Gene3D ABC transporter type 1, transmembrane domain 273 598 IPR036640 GO:0005524|GO:0016021
Car04g01141 1475 Gene3D - 1213 1464 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01141 Car-Chr4 11674116 11681249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01141 1225 1475 Calmodulin-binding Proteins AT2G36910 29.183 1.43e-28 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01141 K05666 - gmx:100811468 2438.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01115 08 11439497 11453341 Car04g01141 04 11674116 11681249 PCT