Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01139 ATGCTTTATCACTCTCTCTTCTTCATCATCATCACTTTCACCAACCTCATTCTCCCTTCACTTTCCTTCCTCACTTCACAAAACCTCACACTCTTTGGTGATGCTTCTTTCACCGACAACTCCATTACTCTCACCAAACAACTCACTTGTCTttcttcttcttcttcttTTGGAAGAGCTTTTTACCTCTACCCTGTTCGTTTTCTTGACCCTTTAACAAACTCAACACCTTCTTTCTCATGTCGTttctctttctccattctctcttcaccttcttgcccttcttcttctGGTGATGGCATTGCCTTTCTCATTTCATCAACCACTCGTTTCTCATCTCTCTCTCGTAATGGTTACATGGGTCTTCCTTCTGATAACCAAGAAGAATCTTCTTATTTCGCTGTCGAATTCGACACCAGTTTTGATCCTTCTCTTGGTGACATTAATGGAAACCATATTGGTATTGATCTTAGCAATGTTGTTTCTTTTGCTTCTGTTGATGCTCTTTCACGTGGAGTTGATTTGAAAAGTGGCAAAATTATCACTGCATGGATAGAGTATAGAGATGATATGAAAATGGTTCGTGTTTGGGTTGGTTACTCTTCAACTAGGCCTCCAACTCCGATTCTTGCTTCACTTGTTGATCTTTCTGAGAGATTCAAAGAGTTTATGCATGTTGGTTTCTCTGCCTCTAATGGCCAGGGTTCAAGTTTTCACCTTGTTCATCATTGGAAGTTCAAAACTTTGAGTTACTCTCATTCTGTTAGTCCTATGGATATGATAGAAGAAGGTGATTGTTTCTTGTGTTATGGTGATGATTCAATAGGTTCCAAGAAAAAAGGTAAAATTTTTAGAAGGAAAAAGATTGGTGAAATTGCTCTTGGAATAGGTGGAGTGACAGCTTTTGTTGTTTCAGCATTAGCAGCAGCTGTTGTGATATGTGTTTTCTTGAGAAGGAAAAAGGGTTTTGTTAGAAAGATTAAAGAAGGTCAAAGTTGTAGATTTCAGACAAATAAAGTTCCAATGAGGTTATCACTTTCAGAGATTACATCAGCTACAATGGGTTTTAACAAAGATATGCTTGTTGGTGAAGGTGCATCAGCAAAAGTTTATAAAGGGTCACTTCCACTTGGAGGTGATGTTGCTGTGAAGAGGTTTGAGAAAGTTGATGATTTGGATTGTTTACACAACCCTTTTGCAACTGAATTTGCCACAATGGTAGGTTGCTTGCGGCACAAGAATCTAGTTCAGCTTAAAGGATGGTGTTGTGAAGGGAATGAATTGGTTTTGGTTTATGAGTACTTACCAAATGGAAGTCTTGATAAAGTTCTACATAGAAACTTAACTTCTTCAATTGTTCTTTCATGGAAGCAAAGGGTTAACATAATTCTAGGTGTCGCTGCGGCTCTTACTTATCTTCATGAAGAGTGTGAGAGACAAATCATTCATAGAGATGTAAAGACATGTAACGTAATGCTTGATGCTGATTTCAATGCAAAGCTAGGCCATGAGAAGAAGTTCTTGTTTTCTTGTGTTTAA 1539 0.3658 MLYHSLFFIIITFTNLILPSLSFLTSQNLTLFGDASFTDNSITLTKQLTCLSSSSSFGRAFYLYPVRFLDPLTNSTPSFSCRFSFSILSSPSCPSSSGDGIAFLISSTTRFSSLSRNGYMGLPSDNQEESSYFAVEFDTSFDPSLGDINGNHIGIDLSNVVSFASVDALSRGVDLKSGKIITAWIEYRDDMKMVRVWVGYSSTRPPTPILASLVDLSERFKEFMHVGFSASNGQGSSFHLVHHWKFKTLSYSHSVSPMDMIEEGDCFLCYGDDSIGSKKKGKIFRRKKIGEIALGIGGVTAFVVSALAAAVVICVFLRRKKGFVRKIKEGQSCRFQTNKVPMRLSLSEITSATMGFNKDMLVGEGASAKVYKGSLPLGGDVAVKRFEKVDDLDCLHNPFATEFATMVGCLRHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNLTSSIVLSWKQRVNIILGVAAALTYLHEECERQIIHRDVKTCNVMLDADFNAKLGHEKKFLFSCV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01139 512 Pfam Legume lectin domain 23 249 IPR001220 GO:0030246
Car04g01139 512 PANTHER - 24 502 - -
Car04g01139 512 Gene3D - 19 261 - -
Car04g01139 512 Gene3D Phosphorylase Kinase; domain 1 319 434 - -
Car04g01139 512 ProSiteProfiles Protein kinase domain profile. 356 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01139 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Car04g01139 512 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 251 IPR013320 -
Car04g01139 512 Pfam Protein kinase domain 357 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01139 512 SMART serkin_6 356 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01139 512 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Car04g01139 512 SUPERFAMILY Protein kinase-like (PK-like) 337 502 IPR011009 -
Car04g01139 512 CDD lectin_legume_LecRK_Arcelin_ConA 25 248 IPR001220 GO:0030246
Car04g01139 512 Gene3D Transferase(Phosphotransferase) domain 1 435 503 - -
Car04g01139 512 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 24 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01139 Car-Chr4 11662303 11664496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01139 3 502 Receptor kinase-like Gene Family AT5G42120 52.952 1.02e-172 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car04g01139 Lectin_legB 1.2e-52 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01139 - - gmx:100783805 653.669