Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01133 ATGGATTTAGTTGAAGGCGTTGGAGAGAGTTCATCGCCTCGGCGTTCATTCGGCGGTTACACTAACTACGATGTCAGGACCGACGTTTACAACCGCTTGGTTGAAACCGGCAACGACCAAGCCGTATTGAATCCGGAGTTTCGTGAACAGTTAGAAGCTCACTTTAATCGTTTACCTCCAAGTTATGGACTTGATGTTAATGTTGATAGAGCTGAAGATGTTTTACTGCATCAGAGACTTCTTGATTTGGCAAGAGACCCGGATAAGCGTCCTGTTTACCATATACGCTTCTTGGAGAATATTTCTACTAGGACAGATGGTGCAGATCAACAACTTGCAAGTACCCATGCTAGTCCTGGGTCATCTACTCATGCAACAAATGGGGGAGTCATGGCATCTCATAAGAGGACTAGGGGTCTGGCAACTGAGTTTGAGCCTTGCTCGAAGCTTGAGGACCTAAATTTGGATGTTATGAAGAACTCCAAGGAGACACAGGAAAATTTTCTTATGGACAGCTTTTCCCAGAGGCATGAACATTCAAGTGTCCCAGTTCATGAAATAATATTTTCCACTATTGACAAACCAAAGCTTTTAAGCCAGCTGTCCGCTTTGCTGTCTGATATTGGCCTTAACATCCGTGAAGCACATGTATTTTCCACCACTGATGGCTACTCCCTCGATGTTTTTGTGGTGGATGGATGGCCACTAGAGGAAACAGATGGTTTGTATGATTCTATGGTAAAAGCTGTAGCTAGAAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGAGAAAGCCTTAGCGTCAGAAGGAAAATCTGGAGACTGGGAAATAGACAGGAGGTCGTTAAAGATAGGAGAAAAATTAGCATCTGGATCCTGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTACTGAGATCTGAGCAACTAAATGATGCCTTAGAGGATGAGTTTACTCAAGAAGTAGCAATTTTGAGACAAGTGCATCATAAAAATGTTGTTCGTTTCATTGGTGCATGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTTTGTATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCAACTACTCAAGTTTGCAATCGATGTCTGCAAGGGAATGGAGTATTTGCATGGAAACAACATAATTCACAGGGATCTGAAGACAGCCAACTTGTTGATGGATACGAAGAATGTTGTTAAAGTGGCAGATTTTGGAGTTGCCCGGTTCCTAAATCAGGGAGGAGTGATGACTGCAGAAACTGGAACATATAGATGGATGGCACCAGAGGTCATAAACCACCAGCCTTATGATCAGAAGGCAGATGTATTCAGTTTTTCCATAGTACTATGGGAACTAGTAACAGCAAAGGTACCGTATGATACCATGACTCCACTGCAAGCTGCTTTAGGTGTGAGACAGGGACTGCGACCAGAACTTCCAAAGCATGGGCATCCTAAGCTATTAGATTTGATGCAAAAATGTTGGGAAGCAATTCCAAGCAGTCGTCCATCCTTCAATGAGATAAGAACTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATAATTCAGAAGCTTATGGTGCTTGA 1656 0.4257 MDLVEGVGESSSPRRSFGGYTNYDVRTDVYNRLVETGNDQAVLNPEFREQLEAHFNRLPPSYGLDVNVDRAEDVLLHQRLLDLARDPDKRPVYHIRFLENISTRTDGADQQLASTHASPGSSTHATNGGVMASHKRTRGLATEFEPCSKLEDLNLDVMKNSKETQENFLMDSFSQRHEHSSVPVHEIIFSTIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETDGLYDSMVKAVARSEGSWSHSSNSHSAVEKALASEGKSGDWEIDRRSLKIGEKLASGSCGDLYHGVYLGEDVAVKVLRSEQLNDALEDEFTQEVAILRQVHHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGNNIIHRDLKTANLLMDTKNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQKCWEAIPSSRPSFNEIRTELENLLLEVENNSEAYGA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01133 551 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 545 - -
Car04g01133 551 ProSiteProfiles ACT domain profile. 186 264 IPR002912 -
Car04g01133 551 CDD STKc_MAP3K-like 293 531 - -
Car04g01133 551 Pfam Protein tyrosine and serine/threonine kinase 287 535 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 545 - -
Car04g01133 551 MobiDBLite consensus disorder prediction 108 136 - -
Car04g01133 551 Coils Coil 528 548 - -
Car04g01133 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Car04g01133 551 SMART serkin_6 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01133 551 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Car04g01133 551 SUPERFAMILY Protein kinase-like (PK-like) 279 541 IPR011009 -
Car04g01133 551 SUPERFAMILY ACT-like 185 248 IPR045865 -
Car04g01133 551 Gene3D Phosphorylase Kinase; domain 1 274 365 - -
Car04g01133 551 MobiDBLite consensus disorder prediction 108 130 - -
Car04g01133 551 ProSiteProfiles Protein kinase domain profile. 287 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01133 551 Gene3D Transferase(Phosphotransferase) domain 1 366 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01133 Car-Chr4 11533564 11548924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01133 24 542 MAP Kinase Kinase Kinase AT2G17700 51.215 5.99e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car04g01133 PK_Tyr_Ser-Thr 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01133 - - mtr:MTR_1g099110 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01133 04 11533564 11548924 Car04g01133 04 11533564 11548924 ECH