Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01130 ATGGAATCAAACAATAATTCATCAATCAACCAAACAAAATTTGTCCATCCAAACAATAATAACCATGAACAACATGCAACACTAGAGATCGAAAGCAACGATTTCGATTACTCGAAACGATCTCAATGGCTAAGAGCGGCTGTTTTAGGAGCCAATGATGGTTTAGTTTCAACAGCATCACTAATGATGGGTGTAGGAGCTGTAAAACAAGACATAAAAGCCATGATCTTGTCAGGTTTTGCTGGTCTTGTAGCTGGTGCTTGTAGCATGGCAATAGGTGAATTTGTCTCTGTTTATTCACAACTTGACATTGAAGTAGCTCAATTAAAAAGAGACAATGAAAGGGGTaataataatgatgaagaagaagaagaaaaagaGAGTTTACCAAACCCTTTACAAGCTGCTGCAGCTTCAGCTTTAGCATTTTCAATAGGTGCAATGGTGCCACTTCTTGCAGCATCTTTTATAAAAGGGTATAAGGTAAGAATAGGAGTTGTTTTAGGAGCTGTGAGTTTTGCTTTGGTGGTTTTTGGTTTGTTTGGGGCACTGTTGGGTAAAGCTCCAATTTTGAAGTCTTGTTTGAGGGTCTTGTTTGGAGGTTGGTTTGCTATGGCTATAACTTTTGGGCTAACTAAGTTGATTGGTTCAAGTGGCCTTTAG 663 0.3741 MESNNNSSINQTKFVHPNNNNHEQHATLEIESNDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQLKRDNERGNNNDEEEEEKESLPNPLQAAAASALAFSIGAMVPLLAASFIKGYKVRIGVVLGAVSFALVVFGLFGALLGKAPILKSCLRVLFGGWFAMAITFGLTKLIGSSGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01130 220 Coils Coil 99 126 - -
Car04g01130 220 MobiDBLite consensus disorder prediction 1 20 - -
Car04g01130 220 MobiDBLite consensus disorder prediction 110 131 - -
Car04g01130 220 Pfam VIT family 44 126 IPR008217 GO:0005384|GO:0030026
Car04g01130 220 Pfam VIT family 125 212 IPR008217 GO:0005384|GO:0030026
Car04g01130 220 CDD Nodulin-21 42 189 - -
Car04g01130 220 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 7 217 - -
Car04g01130 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 7 217 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01130 Car-Chr4 11497072 11497805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01130 15 220 Nodulin-like Gene Family AT3G43660 68.932 9.47e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01130 K22736 - gmx:100815165 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01125 08 11670427 11671796 Car04g01130 04 11497072 11497805 PCT