Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01129 ATGGGGAAGAAGAAGCCATCAGTACGCGACGAAGATAATCCTCCGCCGCAAGCCGGTGGTGGGAAATCAAAGAAGAAGGCTCCTGTCATCGACGACGACGAATACGCTATCGGAGTCGAGTTCTCCGAGGAGCAACCGGTGGCGGCGGCGGAAGAGAAACCGGGTAAAAAGAAAGGTAAAAAAGGTAACTCTAAATCTGTACAAGCTAAAAataatggtgatgattttgatgatgataatgatgatgtgagtgaAGTTGTGTTTGCTGGGAAGAAAAAGGGGAAATCGAAAAAAGGTAGTGGTGGTGGAGGAAGTGTGTTCGCTGCTGCGGCTAGCTTTGGTTTGCTTGGTAGtgatgatgatgacaatggtgatgaagaGAAATCGGAGTTAACTGCCGATCAAGACAGCGATGAGGATGAACCAGTTGTTAGTTTTTCGGGGAAGAAGAAGGCGTCGAAGGGTTCAAAGAAAGGGGGAGGTAGTTTGTTTACTGCCTCTGCTTTTGATGCAATAGATGAGGATGATGATGACAATGGTGTGGAAGAGGACGAACCTGTTGTTGTTTTTTCGGGGAAGAAGAAACCTTCAAAGGGTTCCAAGAAAGGAGGTGGAGGAGGTAGTGTGTTCAGTGCATCGGCTTTtgatgtaattgatgatgataacgaagatgatgagaaggatgagaatgatgttgatgaACCGGTTGTTGCATTTACGGGGAAGAAGAAGTCTTCAAAAGGAAGCAAGAAGGGTGGTTCTTTGTTTTCAGCTGTTAGTTTTGATGAGATTGATGATGGAGAGGAGGAGAATAAGAATGAAAAGGTAGATGATGAAGAAGATATTGGACCAATCACGTTCTCTGGTAAGAAGAAGAAGTCATCCAAGTCTTTGAAGAAGGCGGTTATTCCTGACGAGGATAGTGTTTCTGTGTCCGAGTCTGCTAAAGGTGGCAATGACAAGGATGATGGTGATGATGTTTCGTTAGTTGCATTTACTGGTAAAAAGAAGTCCTCTAAAAAGAAGAGTGGTAATGCTGCTGTCAAAGCGACTGATGAAGTTGGGTTTGGAAGTGAAAGTGTAGATGCTGTTGGGGCTGAGTTACCTAGTGGTGGAATTAGCAATAAAAATGTTGACAATGGTAATATAAATAAAAGTGAAGAGGTCACTGAAACTTCAaaaaataagaagaagaagaataagaagaGTGGGAGAACTGTTCAAGAGGAGGACGATTTAGATAAGATTCTCGCAGAGCTTGGCGAGGGTCCTCCTACAGCAACACCTGCTGCTCCTCCGCAGCAGGAGGATAAGGTTCAGCCTGCTCCTGATGTAGGTTCTGCCCCTGATGTTTCAGGGGAAAAGGAAGGAGAAGAGGATACCGTAGAGTCAGCTGCTGCAaaaaagaagaaaaagaagaaggaaaaggagaaggagaagaaggcagctgctgcagcagcagcagcagcTGGAAGTGCCCAAGTAAATGAAACTGTAGAAGTAAAAGCCGAGATAATTGAACCAAAGAAGAATGATTTGAAGTCCAAAGCAGCTGACAAGAAATTGCCAAAGCATGTTAGGGAGATGCAAGAGGCACTGGCTCGTagaaaagaggcagaagaaagaatgaaaagagaagaggaagagaagcaaaggaaagaagaagaGGAGCGACGAAGGCTAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAAAAACTCCTGAAAAAGAAACAAGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGACGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGAGGTGTGACTCTTCCTGCTGGGGACATTGGTCCACCAGCCAAAAAACCTATTTATCAGACAAAGAAGGGGAAAGCAACTAATCGAAATCAGAATGGTGCTGCTGCTGTCAAGACAGAAGAAACTGTTGAAGCAAAGGAAACTACCACCGATTTGGATTCAGAGGAATCAAAAAAGGTTGAAGAAGTAGAGTCGATGCAGCCAGAGGTCAAAGTCGAAGTTCCtgaagctgtcaaagaggatgaagttgaagatgatgatgatgaATGGGACGCAAAAAGCTGGGATGATGTCAATCTGAATGGTAAGGGTGCATTTGCTGATGAAGAAGTTGACTCAGAGCCTGAACAGATTGTCAAAAAAGAGATTAAAAATGCGGTAGCTGCTAAAAATGCTGGTGCTGCAAATAAAACTCTTTCAAAGCCTGTGGTTGAAGAAGTTGAAGATAGGAAACAAGCCAAAGTTGTGGTTGAGGACAAAAAGAAAATCCACGATTCACAACAGTCTGCCGTTCCTCCTAAGCCGAGTGATGGGAACCTCCGTTCCCCAATTTGCTGCATCATGGGTCATGTGGATACTGGCAAAACCAAGCTTCTGGATTGTATTCGAGGTACCAATGTTCAAGAAGGTGAAGCTGGCGGCCATGAATCGTTCAATAACTTAAGGTCTCGGGGTTCTGGTCTATGTGACATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCCACAAACTATAGAATCACTCAATCTATTAAAAATGAGGAACACAGAATTCATTATTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAGCATGTCGCAATTCTCCAATTCGTAAAGCAATGTTGCAGCAGACTAAGGATGTCCATAATGAGTTTAATATGAGGGTCACTCAGATTGTCACTCAGTTCAAGGAACAGGGGCTAAATACTGAGTTGTATTACAAAAACAAAGAAATGGGAGAAACATTCAGCATCGTACCTACAAGTGCACTAAGTGGTGAGGGAATCCCAGATATGTTACTATTATTGGTTCAGTGGACCCAAAAGACCATGATTGAGAAACTTACATACAGTGATGAAGTGCAGTGTACAGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCACGAAGGAGATCAAATAGTTGGTCCAATTGTTACGACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCGATGGGTATCAAGATCACTGCCCAGGGACTTGAACACGCTATTGCTGGTGCTAGTTTATATGTGGTGAAGCCTGATGATGATTTGGAATATATTAAAAAAGCGGCCTTGGAAGATGTGGAGTCAGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGTGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGaagcattactggagtttttgaaaactccagaagtgaatattcctgttagtgctataagtataggtcctgtacataagaaggatgtgatgaaggccagtgtaatgcttgaaaagaaacgagagtattctactatattggcatttgatgtcaaagtcacccctgaagctagggaacttgcagaagaattgggtgtaaaaattttcatcgccgatatcatttatcatctatttgatcaatttaaggcttacatggacaacattaaggaggagaaaaagaaagaagctgctgatgaggcagtcttcccatgcgttctgaaaatcttaccaaattgtgtcttcaacaagaaggaTCCGATTGTTTTGGGAGTTGATATCCTCGAAGGCATTCTAAAGATTGGAACTCCAATTTGTATTCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCAGTTGATTATGCGAAGAAAGGGCAGAAAGTGGCCATTAAGATTGTTGGCAGCAATTCTGAGGAACAGCAGAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAACTTGTTAGCCATATTTCACGGAGATCTATTGATATTCTCAAAACTAATTATCGGGATGAACTTTCAATGGACGAATGGAAGCTGGTGGTGAAATTGAAGACTCTTTTCAAGATACAATGA 4029 0.3601 MGKKKPSVRDEDNPPPQAGGGKSKKKAPVIDDDEYAIGVEFSEEQPVAAAEEKPGKKKGKKGNSKSVQAKNNGDDFDDDNDDVSEVVFAGKKKGKSKKGSGGGGSVFAAAASFGLLGSDDDDNGDEEKSELTADQDSDEDEPVVSFSGKKKASKGSKKGGGSLFTASAFDAIDEDDDDNGVEEDEPVVVFSGKKKPSKGSKKGGGGGSVFSASAFDVIDDDNEDDEKDENDVDEPVVAFTGKKKSSKGSKKGGSLFSAVSFDEIDDGEEENKNEKVDDEEDIGPITFSGKKKKSSKSLKKAVIPDEDSVSVSESAKGGNDKDDGDDVSLVAFTGKKKSSKKKSGNAAVKATDEVGFGSESVDAVGAELPSGGISNKNVDNGNINKSEEVTETSKNKKKKNKKSGRTVQEEDDLDKILAELGEGPPTATPAAPPQQEDKVQPAPDVGSAPDVSGEKEGEEDTVESAAAKKKKKKKEKEKEKKAAAAAAAAAGSAQVNETVEVKAEIIEPKKNDLKSKAADKKLPKHVREMQEALARRKEAEERMKREEEEKQRKEEEERRRLEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGVTLPAGDIGPPAKKPIYQTKKGKATNRNQNGAAAVKTEETVEAKETTTDLDSEESKKVEEVESMQPEVKVEVPEAVKEDEVEDDDDEWDAKSWDDVNLNGKGAFADEEVDSEPEQIVKKEIKNAVAAKNAGAANKTLSKPVVEEVEDRKQAKVVVEDKKKIHDSQQSAVPPKPSDGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIIALNKVDRLYGWKACRNSPIRKAMLQQTKDVHNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSALSGEGIPDMLLLLVQWTQKTMIEKLTYSDEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAISIGPVHKKDVMKASVMLEKKREYSTILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKEAADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDELSMDEWKLVVKLKTLFKIQ 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01129 1342 MobiDBLite consensus disorder prediction 655 693 - -
Car04g01129 1342 Gene3D - 1092 1198 IPR036925 -
Car04g01129 1342 PANTHER PHOTOSYSTEM II PROTEIN D1 1 830 - -
Car04g01129 1342 Gene3D Translation factors 978 1091 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 1 82 - -
Car04g01129 1342 Gene3D - 794 828 IPR027417 -
Car04g01129 1342 MobiDBLite consensus disorder prediction 694 708 - -
Car04g01129 1342 CDD IF2_aeIF5B_IV 1213 1308 - -
Car04g01129 1342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 796 1041 IPR027417 -
Car04g01129 1342 MobiDBLite consensus disorder prediction 638 652 - -
Car04g01129 1342 Gene3D Translation factors 1205 1342 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 373 388 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 170 184 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 615 715 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 115 600 - -
Car04g01129 1342 SUPERFAMILY Translation proteins 1209 1341 IPR009000 -
Car04g01129 1342 MobiDBLite consensus disorder prediction 773 792 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 262 276 - -
Car04g01129 1342 CDD aeIF5B_II 979 1080 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 451 470 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 403 418 - -
Car04g01129 1342 Gene3D - 829 977 IPR027417 -
Car04g01129 1342 Pfam Elongation factor Tu GTP binding domain 828 967 IPR000795 GO:0003924|GO:0005525
Car04g01129 1342 PANTHER PHOTOSYSTEM II PROTEIN D1 828 1342 - -
Car04g01129 1342 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 828 1342 IPR015760 -
Car04g01129 1342 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 830 IPR015760 -
Car04g01129 1342 MobiDBLite consensus disorder prediction 502 600 - -
Car04g01129 1342 Pfam Translation-initiation factor 2 1080 1191 IPR023115 -
Car04g01129 1342 MobiDBLite consensus disorder prediction 316 330 - -
Car04g01129 1342 Coils Coil 522 589 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 217 232 - -
Car04g01129 1342 MobiDBLite consensus disorder prediction 119 141 - -
Car04g01129 1342 Coils Coil 455 487 - -
Car04g01129 1342 CDD IF2_eIF5B 798 968 - -
Car04g01129 1342 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1075 1204 IPR036925 -
Car04g01129 1342 Pfam Elongation factor Tu domain 2 994 1067 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01129 Car-Chr4 11483345 11492427 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01129 233 1342 Eukaryotic Initiation Factors Gene Family AT1G76810 60.699 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01129 K03243 - gmx:100814640 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01129 04 11483345 11492427 Car04g01129 04 11483345 11492427 ECH