Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01124 ATGGATGGGAATTTGTCACAAGGTGGAATACTTCAAAGTGGGGTTGGGAATTCTTTTGGTGGTTTTGATTTGCCTGGATCAATTCAGGTtcatcatcaagcacatcatcctcacaccattcaccaacatcaagttcatcCGAATCGAGGGTCTTCGCTACATTCATCAGATCATGATGGTTTTCCACTCACAATGGGAACTTTACAGAATTGTGATCAAAACATTTCAATGGGAGATAGAAGCAAAAACTCGACGAGTGAGGATGATGAGCCTAGTTTTAATGAGGATGGTTTTGATGGTCAACATGAATTGGGGAGAGGTAAAAAGGGATTGTCGTCGCCTTGGCAGAGGGTGAAGTGGACTGATAAGATGGTGAGGCTTATGATAACAGCGGTTTCTTATATAGGCGAGGATATAACTTCtgatggtggtggtggtggcagtggAAGAAAGAGATTCGCGGTTTTACAGAAGAAGGGTAAATGGAAATCTGTATCAAAGGTTATGGCTGAAAGAGGTTGTCATGTTTCTCCTCAGCAATGTGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAAACTTAATGATATGTTAGGGAGAGGAACTTCTTGTCAAGTTGTTGAAAATCCCGGACTTTTGGATTTAATAGATTATCTTTCCGAGAAAGAAAAGGATGACGTTCGAAAAATATTAAGCTCAAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATGGTAATAGGTTGCATTTGCCGCATGATCCTGCATTGCAATGTTCGATGCAATTAGCTATTAGAAATAGAGATGATCATGATAACGATGATATTAGAAGGTTTCATCTTGATGGTCACGACGAAGATGAGCAAGATGTAGAAATTGATGAACATGATGATTTTAAAGAAACTTGTGCTTCCCGTAGTCATAGCCGAGGAATATTTGGACAGTTAAGTGGATCTACGAAGAAATTGAAACAGATCCAAGGTCAAGAAGATGCTAATGCTTTTGGTAATTCATTGAATTGTCAAGATTACAACAAAGGTTCATATCCGCGTGGACAAATGGTCCATTCTGATGTTAATCAAGCTTTACCTGAAAGCACGAGAACAGCGTGGTTACAGAAGCAATGGCTCGACTCTCGCCAATTTCAGTTGGAAGAGCAAAAGCTACAAATTCAGGTTGAGATGTTGGAATTAGAGAAGCAGAGATTCAAGTGGCAGAGATTTAGTAAGAAAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAACGAAAGAATGAAGATTGAAAACGAACGTATGGCTTTAGAACTGAAGCGAAAGGAAATGAATATTGGCTTTAAGTAG 1350 0.3644 MDGNLSQGGILQSGVGNSFGGFDLPGSIQVHHQAHHPHTIHQHQVHPNRGSSLHSSDHDGFPLTMGTLQNCDQNISMGDRSKNSTSEDDEPSFNEDGFDGQHELGRGKKGLSSPWQRVKWTDKMVRLMITAVSYIGEDITSDGGGGGSGRKRFAVLQKKGKWKSVSKVMAERGCHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPGLLDLIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQCSMQLAIRNRDDHDNDDIRRFHLDGHDEDEQDVEIDEHDDFKETCASRSHSRGIFGQLSGSTKKLKQIQGQEDANAFGNSLNCQDYNKGSYPRGQMVHSDVNQALPESTRTAWLQKQWLDSRQFQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKIENERMALELKRKEMNIGFK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01124 449 MobiDBLite consensus disorder prediction 44 81 - -
Car04g01124 449 Gene3D - 120 194 - -
Car04g01124 449 Coils Coil 381 401 - -
Car04g01124 449 PANTHER FACTOR, PUTATIVE-RELATED 1 448 - -
Car04g01124 449 Coils Coil 411 445 - -
Car04g01124 449 MobiDBLite consensus disorder prediction 82 106 - -
Car04g01124 449 PANTHER F16F4.11 PROTEIN-RELATED 1 448 - -
Car04g01124 449 Pfam Myb/SANT-like DNA-binding domain 117 245 IPR044822 -
Car04g01124 449 MobiDBLite consensus disorder prediction 31 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01124 Car-Chr4 11438565 11439914 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01124 Myb_DNA-bind_4 6.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01124 - - gmx:100812134 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01124 04 11438565 11439914 Car04g01124 04 11438565 11439914 ECH
Car08g01130 08 11752575 11754705 Car04g01124 04 11438565 11439914 PCT