Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01123 ATGATGGGTGAGTCAGCTATTATGAGTGGCGGTGGTGAAGGTGGAGATGCAGTGGCGGTCACCGGAAGTCATAACATGACGGCGGAAGTGGTCTCAGGTGGTGGAGTTGGATCAAATTCAGGGAGTGATATTGAGAGAGGTAGAATTGAAGAAGGTGAACGTAGCTTCGGGGGTAACCGGTGGCCGCGACAAGAAACTTTGGCGCTTTTAAGGATACGATCTGATATGGACATAACTTTTCGAGATGCAAGTGTTAAAGGTCCCTTGTGGGATGAAGTTTCAAGGAAACTAGCAGAACTTGGGTATAATAGAAGTGCCAAAAAATGCAAAGAGAAATTTGAAAATGTTTACAAGTACCACAAGAGAACCAAAGACGGTCGAGGTGGAAAATCAGATGGGAAAACTTATCGATTTTTTGATCAATTAGAAGCCCTTGATCATATTCACAACCACCCTTCAACTCATCAACCACAAAACCTATTAAAACAACCACAGTCAACACCAACACTATCGCAAGTTATTACAACTTCAATAACAGAAACAGCAACAATGCCACAAGTGGTTAACACCACACTGAGTATGCCTCATGCAACTGTTCCATCAATTTCCATGCCTCAAAACAATATTGTAACTACTCAAGCAATGAATGTGAACATCACTACTATACCTTCCAATCCTTCAACTAGCTTCCAACCATCAACAACAAATCCTCCTCAATCACTTTCTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCCCTAACATTCCTACCGATCTATTATCTAATTCGATGGTGAGCTCTTACTCAACCTCTTCGGATGACACAATGGAAGGGACGCAGAAGAGGAAACGCAAATGGAAGGACTTTTTTGAGAAACTAATGAAGGAAGTGATTGAGAAGCAAGAACAGTTACATAAGAGATTCTTAGAAGCCATTGAGAAACGTGAACATGACCGAATGGTTAGAGAAGAAGCATGGAGAGCACAAGAGATGCAAAGAATTAATAGAGAGAGGGAAATTCTTGCACAAGAAAGATCTATAACTGCAGCAAAAGACGCTGCAGTTATGTCTCTCTTACAAAAAATTGCTCAACAACCAAATCTTGGACATGCATTGAATAACATCAATGTTGCacaaccactaccaccacaacaatcgccacaacaacaaccaccaccaagtaaagcaccaacatcgacaccagcaccaacaCTAGTGGCACAAGTAATTAATGCTCCACCGCCAGTGCAACCACCACCGGTTACTCCGTCGGGCCCACCAATGGTCCAACAGCAGCAACAAATAGCGAAAAACATGGAAATAGTAAAATTTGATAATAATGGAGATAATTCAATTGGAGCAAGTTCATCAAGGTGGCCAAAAGTGGAAGTTCAAGCATTGATAAATCTGAGAACGGAGCTAGACAATAAGTACCAAGAGAATGGACCAAAAGGGCCACTATGGGAAGAAATATCTTCAGCAATGAAGAACCTTGGATACAATAGGAACCCAAAAAGGTGCAAAGAAAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAAAGTAACAAGAAGAGACCCGAAGATTCCAAGACATGTCCTTATTTTCACCAGTTGGATGCTTTATATAAGGAGAAAAACAAGGCGGAAAATTCCGGTGGTGGTTCAAGCCAGCCGACTAATGCGGAGAGTATGGTGGCACCGTTAATGGTTCAGCCGGAGCAACAATGGCCACCTCAACAGGAAGGAGATCCAATGGAGCGGAACCGCAGAgacgaagaagatgatatggatgaagatgataaagatggtgaagaagaagacgacgaagagatggatgaaggtggtggtggtgGTAGTAATTTTGAAATAGTGGCTAACAAGCCTTCAGTGGGTGCATAA 2049 0.3533 MMGESAIMSGGGEGGDAVAVTGSHNMTAEVVSGGGVGSNSGSDIERGRIEEGERSFGGNRWPRQETLALLRIRSDMDITFRDASVKGPLWDEVSRKLAELGYNRSAKKCKEKFENVYKYHKRTKDGRGGKSDGKTYRFFDQLEALDHIHNHPSTHQPQNLLKQPQSTPTLSQVITTSITETATMPQVVNTTLSMPHATVPSISMPQNNIVTTQAMNVNITTIPSNPSTSFQPSTTNPPQSLSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPNIPTDLLSNSMVSSYSTSSDDTMEGTQKRKRKWKDFFEKLMKEVIEKQEQLHKRFLEAIEKREHDRMVREEAWRAQEMQRINREREILAQERSITAAKDAAVMSLLQKIAQQPNLGHALNNINVAQPLPPQQSPQQQPPPSKAPTSTPAPTLVAQVINAPPPVQPPPVTPSGPPMVQQQQQIAKNMEIVKFDNNGDNSIGASSSRWPKVEVQALINLRTELDNKYQENGPKGPLWEEISSAMKNLGYNRNPKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKNKAENSGGGSSQPTNAESMVAPLMVQPEQQWPPQQEGDPMERNRRDEEDDMDEDDKDGEEEDDEEMDEGGGGGSNFEIVANKPSVGA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01123 682 MobiDBLite consensus disorder prediction 420 452 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 642 665 - -
Car04g01123 682 Pfam Myb/SANT-like DNA-binding domain 59 145 IPR044822 -
Car04g01123 682 Pfam Myb/SANT-like DNA-binding domain 504 591 IPR044822 -
Car04g01123 682 ProSiteProfiles Myb-like domain profile. 59 117 IPR001005 -
Car04g01123 682 ProSiteProfiles Myb-like domain profile. 498 562 IPR001005 -
Car04g01123 682 MobiDBLite consensus disorder prediction 431 446 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 147 173 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 222 245 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 599 614 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 222 242 - -
Car04g01123 682 CDD GT1 504 569 - -
Car04g01123 682 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 675 - -
Car04g01123 682 PANTHER - 2 675 - -
Car04g01123 682 SMART sant 57 119 IPR001005 -
Car04g01123 682 SMART sant 502 564 IPR001005 -
Car04g01123 682 CDD GT1 59 124 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 151 173 - -
Car04g01123 682 MobiDBLite consensus disorder prediction 593 682 - -
Car04g01123 682 Gene3D - 506 567 - -
Car04g01123 682 Gene3D - 61 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01123 Car-Chr4 11412404 11415344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01123 323 631 Trihelix Transcription Factor Family AT1G76890 46.926 3.15e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01123 Myb_DNA-bind_4 7.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01123 - - lang:109354958 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01123 04 11412404 11415344 Car04g01123 04 11412404 11415344 ECH