Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01122 ATGGAGCTTGGAGATGCAACAGTGATGGATAGTTCCTCCGGTGAGATTGTGGCACCGGAGGTGCATGACGGCGGCGATGAGAAAGGAAGGAATGGTGGTGAGGAAGATGATAAGATGATGAATATTACTGGTAGTGGTGGAAATAGGTGGCCCCGGCAAGAAACATTGGCTTTGTTGAAGATAAGGTCAGATATGGATGGTGTGTTTAGAGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTTCAAGGAAACTAGCTGAACTTGGTTATCATCGAAACGCAAAGAAGTGCAAGGAGAAATTTGAGAATGTATACAAGTACCACAAAAGAACCAAAGAAGGTAAAAGTGGAAAAAAATCCGAAGGAAAAACATATAGGTTTTTTGATCAATTACAAGCACTTGAAAAGCAATTCTCACTCTCTTCTTATCCTCCAACTTCAAAACCACAACCTAATAACAACATAGTGTCATTGCCAACAAAGCCTAATAACACTACAACAATATCACATGTTCCATCCACAAACCCTACCACACTCATTTCTCCTTcaccaccaccgccgttgccgccaccaaccaacgccacaaccaccccaacattaaccaacaataaaaacaacaacaaTGTTCAATATTCTTTGCCAAACATGAATCTATTCTCAACCACAACAACCTCAACTTCTTCTTCCACGGCTTCTGATGAAGACTTGGAAGAGAAGTACAGAAAGAAGAGAAAATGGAAGGACTATTTCAGAAGACTTACAAGAGAAGTGTTGATAAAACAAGAGGAAATGCAAAAGAAGTTCTTAGAAGCCATAGACAAACGTGAGAGAGAACACATGGCTCAACAAGATGCTTGGAGAGTTCAAGAAATGAATCGAATCAATAAAGAACACGAACTTCTTGTCCAAGAAAGATCAACAACAGCCGCAAAAAATGCGGCTGTTATTGCCTTTCTTCAAAAATTGTCTGGACAACAAAATTCGACAATACAAGATAATTTTATTCAGccgccaccaccaccacaaccaacaccaccaGAGTCAGCTCAAACTCCTATATCACAACTACAAATACAACCACACGAACCGGTGACGTCAAACAACAACATTGTTGAAATTCACCAGAATAACGGACACAAAAGTGGTGGTGGAGCTTCATCAAGGTGGCCAAAATCTGAAGTTCATGCTCTTATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGACCAAAAGCACCATTATGGGAAGATATATCAGCTGGAATGCAAAGACTAGGGTACAATAGAAATTCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGGTAGTAAAACATGTCCTTATTTTAATGAACTTGAAGCTCTTTACAAAGAAAAGAACAAAACATTTCATAATAATATTATCAAGTCAAGTGAGATGATGGAACCATTGATGGTGCAACCTGAACAACAATGGAGACCTCcaacaacaataacaacaacTCAATATgacgaagaggaaaagaagaagaagaatagtaatgaagttgaagcaaaagaagaagattatgatgataatgatgatgatgaatatgatgagggagatagcatggaagaagaagaagaagatgaagGGGGTGTTAATAGCCGTTATGAAGTTATGACAAATAAACTTTCACCAGTGGACACAGTTGAATGA 1737 0.3287 MELGDATVMDSSSGEIVAPEVHDGGDEKGRNGGEEDDKMMNITGSGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGKSGKKSEGKTYRFFDQLQALEKQFSLSSYPPTSKPQPNNNIVSLPTKPNNTTTISHVPSTNPTTLISPSPPPPLPPPTNATTTPTLTNNKNNNNVQYSLPNMNLFSTTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTREVLIKQEEMQKKFLEAIDKREREHMAQQDAWRVQEMNRINKEHELLVQERSTTAAKNAAVIAFLQKLSGQQNSTIQDNFIQPPPPPQPTPPESAQTPISQLQIQPHEPVTSNNNIVEIHQNNGHKSGGGASSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAGMQRLGYNRNSKRCKEKWENINKYYKKMKESNKQRRDGSKTCPYFNELEALYKEKNKTFHNNIIKSSEMMEPLMVQPEQQWRPPTTITTTQYDEEEKKKKNSNEVEAKEEDYDDNDDDEYDEGDSMEEEEEDEGGVNSRYEVMTNKLSPVDTVE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01122 578 CDD GT1 48 113 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 532 559 - -
Car04g01122 578 Pfam Myb/SANT-like DNA-binding domain 48 134 IPR044822 -
Car04g01122 578 Pfam Myb/SANT-like DNA-binding domain 388 475 IPR044822 -
Car04g01122 578 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 25 567 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 335 349 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 179 195 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 499 578 - -
Car04g01122 578 ProSiteProfiles Myb-like domain profile. 388 446 IPR001005 -
Car04g01122 578 PANTHER - 25 567 - -
Car04g01122 578 Gene3D - 50 111 - -
Car04g01122 578 Gene3D - 390 451 - -
Car04g01122 578 ProSiteProfiles Myb-like domain profile. 48 106 IPR001005 -
Car04g01122 578 CDD GT1 388 453 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 331 352 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 20 37 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 142 178 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 1 49 - -
Car04g01122 578 MobiDBLite consensus disorder prediction 515 531 - -
Car04g01122 578 SMART sant 386 448 IPR001005 -
Car04g01122 578 SMART sant 46 108 IPR001005 -
Car04g01122 578 MobiDBLite consensus disorder prediction 142 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01122 Car-Chr4 11390710 11393676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01122 43 504 Trihelix Transcription Factor Family AT1G76890 50.408 1.83e-141 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01122 Myb_DNA-bind_4 7.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01122 - - gsj:114370603 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01131 08 11827531 11831097 Car04g01122 04 11390710 11393676 PCT