Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01115 ATGGCTTCTTCAAAATTGATGGCTTCTTCCAATTCAATAAATTCTGATCCACCTTCTTCTCCTTCTTCCAAATCCCAATTCACCACCACCAATTTCCTCGACAATTCCACCCTCCTCGACTCTCAAATCTCCCTCGCCGACGCCGTCTCCACTCCCAGAACCGTGGACGATGTCTGGCGAGAGATCGTCGCCGGCGATCGCAGAGACTGCAAAGAGGAGATCCCCGACGAGATGATGACACTCGAGGATTTCCTCGTTAAAGCCGGCGCCGTCGATGATGAAGACGACGGTGATGATGTCAAGATGACGATACCGCTCACGGAGACGCTAAGCGGAAGCGGTATGTTTGCGGTTGATCCTACGTTTCAGGGAATTGAGAGTGTTGAAGGTTCGGTGATAGGGTTTGGGAATGGAGTGGAGGTAGTTGAAGGAGCGAGGGGTAAGAGAGGAAGACCCGTTTTAGAGCAGTTGGATAAGGCTGCTCAACAGAGACAGAGGAGAATGATCAAAAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAACAGGCTTACCAAGTGGAATTGGAGTCCTTGGCGGTGAAACTAGAGGAGGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAGGACGAAGGAGAGGTTCAAGCAGGTTGCTTGTATATGA 666 0.5 MASSKLMASSNSINSDPPSSPSSKSQFTTTNFLDNSTLLDSQISLADAVSTPRTVDDVWREIVAGDRRDCKEEIPDEMMTLEDFLVKAGAVDDEDDGDDVKMTIPLTETLSGSGMFAVDPTFQGIESVEGSVIGFGNGVEVVEGARGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQVACI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01115 221 SUPERFAMILY Leucine zipper domain 163 214 IPR046347 GO:0003700|GO:0006355
Car04g01115 221 SMART brlzneu 159 220 IPR004827 GO:0003700|GO:0006355
Car04g01115 221 CDD bZIP_plant_BZIP46 163 209 - -
Car04g01115 221 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 217 IPR043452 GO:0003700|GO:0045893
Car04g01115 221 Gene3D - 161 217 - -
Car04g01115 221 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
Car04g01115 221 Coils Coil 182 214 - -
Car04g01115 221 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 31 217 - -
Car04g01115 221 MobiDBLite consensus disorder prediction 1 28 - -
Car04g01115 221 Pfam bZIP transcription factor 161 213 IPR004827 GO:0003700|GO:0006355
Car04g01115 221 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 213 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01115 10 218 bZIP Transcription Factor Family AT5G44080 46.218 6.36e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g01115 bZIP_1 1.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01115 K14432 - gmx:100808917 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01115 04 11249137 11253538 Car04g01115 04 11249137 11253538 ECH