Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01105 ATGTATCACGGCGCCGAAGCCGTCGTGGCCGCAATCGGCAGCTTTATCATCGTCACAGTTATACTCGCCGCCATCATTCTCATCTTCAAACTCCGCAAACAAACCCAAACCCGCCGCAACAACCAGATCCGAACCCGAGCCTTTCGAAACACTAACCCGAACAGCTCCAATTCCCTCCCTGTTGACGCCAGCTGGTCATGGGATCCCAATCTCAAGATCTCCATGGAAGAACTCACACGCGCCACCAATAACTTCTCCTCTCACCTCATCGTCGGCGACGGAAGCTTCGGCCTCGTCTACAAAGCTCATCTCTCCACCGGCGTAACCGTCGCCGTAAAAAAACTCTCCCCCGACGCCTTCCAAGGATTCCGCGAATTCGCGGCGGAGATGGAAACCCTAAGCAAACTCCGCCACCACAACATCGTCAAAATCCTCGGTTACTGGGCTTCTGGACCTGAGCGGTTACTCGTTTACGAGTTCATCGAGAAAGGAAACCTCGATCAATGGCTTCACGAACCTTCTTCTCCAACTCACCAAAACGACGACGTTTCAACCGATCTAATTCCTTCTCCTTTGTCTTGGGAAACAAGGGTTAACGTCATTCGGGGTGTTGCTCATGGGCTTTGCTATTTACACGGACTCGAGAAGCCCATTATTCACCGAGACATCAAAGCTAGCAATGTGTTATTGGACTCTAATTTTGAGGCCCATATTGCTGATTTTGGGCTTGCTCGTAGAATGGACAAGTCGCATTCCCACGTGTCAACGCAGTTCGCAGGTACAATTGGTTACATGCCTCCGGAGTATAGAGATGGGTCTAATGTGGCTAACCCGAAAGTGGATGTGTACAGTTTTGGAGTGTTGATGATGGAAACTGTATCAGGCCACAGGCCCAATTTGTCGGTGAAATTGGATGGAGTTGATATTGGGCTTGTTAATTGGGCTAGGATGATGAAGGAAAGAAACACTGAGGTGGAGATGCTCGATGTAAATATTCCAAGAGAAGAAGCGTTGAAGGAGGAAAGTGTTGGGGAGTATGTGCGCATTGCTTGTATGTGTACTGGTGAGTTACAGAAGGATAGGCCTGAAATGTCTGAGGTTGTCAAATTATTGGACTCGATGTCCCTTTGA 1131 0.4916 MYHGAEAVVAAIGSFIIVTVILAAIILIFKLRKQTQTRRNNQIRTRAFRNTNPNSSNSLPVDASWSWDPNLKISMEELTRATNNFSSHLIVGDGSFGLVYKAHLSTGVTVAVKKLSPDAFQGFREFAAEMETLSKLRHHNIVKILGYWASGPERLLVYEFIEKGNLDQWLHEPSSPTHQNDDVSTDLIPSPLSWETRVNVIRGVAHGLCYLHGLEKPIIHRDIKASNVLLDSNFEAHIADFGLARRMDKSHSHVSTQFAGTIGYMPPEYRDGSNVANPKVDVYSFGVLMMETVSGHRPNLSVKLDGVDIGLVNWARMMKERNTEVEMLDVNIPREEALKEESVGEYVRIACMCTGELQKDRPEMSEVVKLLDSMSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01105 376 Gene3D Phosphorylase Kinase; domain 1 45 160 - -
Car04g01105 376 SMART serkin_6 85 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01105 376 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Car04g01105 376 SUPERFAMILY Protein kinase-like (PK-like) 65 371 IPR011009 -
Car04g01105 376 CDD STKc_IRAK 91 374 - -
Car04g01105 376 Pfam Protein tyrosine and serine/threonine kinase 90 370 IPR001245 GO:0004672|GO:0006468
Car04g01105 376 ProSiteProfiles Protein kinase domain profile. 85 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01105 376 Gene3D Transferase(Phosphotransferase) domain 1 161 376 - -
Car04g01105 376 PANTHER OS01G0253100 PROTEIN 1 373 IPR045271 GO:0004714|GO:0006468
Car04g01105 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Car04g01105 376 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01105 Car-Chr4 11168458 11170002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01105 16 371 Receptor kinase-like Gene Family AT5G07280 38.710 8.45e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Car04g01105 PK_Tyr_Ser-Thr 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01105 - - lang:109335579 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01105 04 11168458 11170002 Car04g01105 04 11168458 11170002 ECH