Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01090 aTGCCGGGATTGGAGACGGGGACACCGACGGCAGCGTCGACGCCGGCGACACCGGATACTCCGGGAGGTCCACTATTTTCATCGGTGCGAGTTGACTCATTGGACCAACGTGAATCGTTTGGAATGGGTAGGTGCAACAATTGTTTTCCGGGTAAAAGTAATGGAGGTTGCATCAATATCGCCGATTTCTCTGCTAGTGTTTCTCTCACTCAAAAGATTGGAGCAGAGTTTGTAGGGACATTCATATTAATATATGCAGCAACAGCAGGACCAATAGTGAACAACAAATACAATGGAGCAGAATCACTTATGGGAAATGCAGCTTGTGCTGGATTAACAGTTATGTTCATTATTCTCTCAATTGGTCACATCTCAGGTGCACATCTCAATCCATCACTCACAATTGCGTTCGCTGCGTTTCGCCATTTCCCTTGGGCACACGTTCCTGCCTACATTGCTGCACAAGTTTCTGCTTCTATTTGTGCTTGTTATGCTCTCAAAGTTGTTTACCATCCTTTCCTTACTGGTGGTGTCACTGTCCCTACTGTTAGCATTGGTCAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGTCACTGCTGTTGCCACCGATACTCGCGCGGTTGGTGAATTAGCTGGTATTGCTGTTGGGGCTACAGTTTTGCTCAACATTCTCATCTCAGGGCCAACCAGTGGTGGTTCGATGAACCCGGTGCGCACCTTAGGTCCAGCAGTTGCAGCAGGAAATTACAAACATATCTGGATATATTTAGTGGCGCCGACGCTCGGTGCTCTTGCTGGTTCTGGAGTTTATACGCTTGTCAAGCTGCGTGACAACGAAGCTAATCCAGCGCAATCGGTTAGAAGCTTCCGTCGCTAG 894 0.472 MPGLETGTPTAASTPATPDTPGGPLFSSVRVDSLDQRESFGMGRCNNCFPGKSNGGCINIADFSASVSLTQKIGAEFVGTFILIYAATAGPIVNNKYNGAESLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIAAQVSASICACYALKVVYHPFLTGGVTVPTVSIGQAFATEFIITFILLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGSGVYTLVKLRDNEANPAQSVRSFRR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01090 297 PRINTS Major intrinsic protein family signature 71 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PRINTS Major intrinsic protein family signature 110 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PRINTS Major intrinsic protein family signature 147 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PRINTS Major intrinsic protein family signature 191 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PRINTS Major intrinsic protein family signature 222 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PRINTS Major intrinsic protein family signature 259 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 PANTHER AQUAPORIN NIP5-1-RELATED 10 294 - -
Car04g01090 297 MobiDBLite consensus disorder prediction 7 21 - -
Car04g01090 297 MobiDBLite consensus disorder prediction 1 26 - -
Car04g01090 297 PANTHER AQUAPORIN NIP2-1 10 294 IPR034294 -
Car04g01090 297 ProSitePatterns MIP family signature. 128 136 IPR022357 -
Car04g01090 297 Gene3D Glycerol uptake facilitator protein. 59 292 IPR023271 -
Car04g01090 297 Pfam Major intrinsic protein 66 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g01090 297 SUPERFAMILY Aquaporin-like 66 286 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01090 Car-Chr4 11065796 11070598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01090 25 297 Major Intrinsic Protein MIP AT4G10380 72.043 4.53e-138 390