Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01067 ATGGAAAATATTCCCCCATTGATTTACAAAAATCCAATTAGAAGAACCTCAAGAAGATCTACAATGTATCTTGGTGTCAGAAAAAGACCATGGGGAAAATATGCAGCTGAGATTAGAAATCCATTTACCAAAGAGAGACATTGGTTAGGAACATTTAACACTGCAGAAGAAGCTGCAATAGCTTATGATATTTCATCTATTAATATTTGTGGCATTCATAATGCTAGAACTAATTTTCATTATCCTTTTTTATCTAATTATTTTCAACCTCCTCTATTTTTGCCTCCTCCACCTCCACCACCCGTCTCCGAATTGGATACTATTAGTAATTTGAAGACGAATGTCGATGTTGATGATGAATCTCTTGTTATTGCTTCCATCTTGCAAAGTTTTTCATGTTCTGGTAGTTATTCTTTATAG 420 0.3405 MENIPPLIYKNPIRRTSRRSTMYLGVRKRPWGKYAAEIRNPFTKERHWLGTFNTAEEAAIAYDISSINICGIHNARTNFHYPFLSNYFQPPLFLPPPPPPPVSELDTISNLKTNVDVDDESLVIASILQSFSCSGSYSL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01067 139 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 1 129 - -
Car04g01067 139 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 129 - -
Car04g01067 139 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Car04g01067 139 Pfam AP2 domain 24 63 IPR001471 GO:0003700|GO:0006355
Car04g01067 139 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Car04g01067 139 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Car04g01067 139 CDD AP2 23 79 IPR001471 GO:0003700|GO:0006355
Car04g01067 139 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Car04g01067 139 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Car04g01067 139 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01067 Car-Chr4 10847845 10848299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01067 23 81 AP2-EREBP Transcription Factor Family AT1G12890 74.576 1.96e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car04g01067 AP2 2.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01067 - - cam:101492641 224.172