Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01056 ATGGCTGGAAATCCCGCAACTCCCTCCTCCACATTTTCTCGCGAGAATTTGAATTTGTCGTCCGATTTCCCCACCCGAATCTCCCTCACTTCCGATCAGGTCAAGCACTGCACGGAAGCACTCGCTTTGTTGAAGGACAAGCGCCGAAACCCTCACACCATCTCCCAAGAGTTTCTTCACTTGCAGGCGAACAGGATAACGCCGAGTGAGATGACGAGAAGATGCAGCGTTGCTCTTAATTCTGTCAATATCAGCAAAAATCGATACACAGATGTTTTACCATTTGATAAGAACAGGGTTGTTCTTAATTCCAGTTCAGATTATAGGTCTGCAGCACTGGGGTATATCAATGCAAGCTTTATATCGACCTCTTCCCCTGGAACTGTATCTGAATTTCTAGCCACACAAGGCCCGCTTCCACACACTTATGAGGATTTCTGGGAAATGATTATCCAATATCACTGTCCTGCAATTGTGATGCTTACTAGGTTGGTCGACAATTACAAGATGAAGTGTGGAGATTATTTTCAAGCTGAGGATAGACCTAGAGAATTAGGCAATATCTCACTTACATGTAAATGGGCGAAAACTACTGAAACTTCATTAGTGCTGCGCCATTTTGAGGTTAACCATAGAGAGGTAGAAAATGCGCCATTATCTGTTTTGCATATTCAGTATCCTGAGTGGCCTGACCATGGAGTTCCAAATGATACTTTGGCTGTGCGTGAAATTTTGAAAAGATTATATCATTTGCCACCAAACCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGCAGAACTGGAACATACTGCACAATTCACAACACAATTCAGCGAATACTTGCTGGTGATATGTCTGCAGTAGATATTGCTAACACAATATCTGTGTTCAGATCCCAGCGTATTGGAATGGTTCAGACCCAGGACCAGATAGTAGAAGTGCTAGATAAAAGGATGTCAAGCTGCTTGCCTCATTCTTCTGAAGCCAACTCTCTATTCTTCGGAGAAATCTTACAAATATCAGCATATTTTTCAATATATTTCTACATTTCTGTTGAACAGAAGCATACTAATGACCATGATAATCTAAATTCCATTGTCCTCTTATTATTTTTCTTCAAGTGCCATAGTGACATGTGTAGTTACCCCGTTGACCAGGGCAAGgggatctttgacaacagggaatccgTTTTCATTTGCTTCAAGCTGATCTACTGCAATCTTCAAGAGAGAGAAGATTCTGCTTCTTCTGAGCTTTTGTGTTTGCGTGTAACAAACAACACTTCAATCACTCTCTTCAATTCTTCATCGATCCCTTTCTTTCACCCCCTTTCTCATTTCCTTGCACCCCCCACCCACTTTCATTTTTCTGTCAGAATCACAACGAACAACACACATGCACCTTCTCACAGATCTCTGCTACTGATTTGGTGA 1440 0.4146 MAGNPATPSSTFSRENLNLSSDFPTRISLTSDQVKHCTEALALLKDKRRNPHTISQEFLHLQANRITPSEMTRRCSVALNSVNISKNRYTDVLPFDKNRVVLNSSSDYRSAALGYINASFISTSSPGTVSEFLATQGPLPHTYEDFWEMIIQYHCPAIVMLTRLVDNYKMKCGDYFQAEDRPRELGNISLTCKWAKTTETSLVLRHFEVNHREVENAPLSVLHIQYPEWPDHGVPNDTLAVREILKRLYHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSAVDIANTISVFRSQRIGMVQTQDQIVEVLDKRMSSCLPHSSEANSLFFGEILQISAYFSIYFYISVEQKHTNDHDNLNSIVLLLFFFKCHSDMCSYPVDQGKGIFDNRESVFICFKLIYCNLQEREDSASSELLCLRVTNNTSITLFNSSSIPFFHPLSHFLAPPTHFHFSVRITTNNTHAPSHRSLLLIW 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01056 479 Pfam Protein-tyrosine phosphatase 83 314 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 4 316 - -
Car04g01056 479 CDD PTPc_plant_PTP1 115 312 - -
Car04g01056 479 Gene3D Protein tyrosine phosphatase superfamily 26 319 IPR029021 -
Car04g01056 479 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311|GO:0016791
Car04g01056 479 ProSiteProfiles PTP type protein phosphatase domain profile. 54 313 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 SMART ptp_7 220 322 IPR003595 -
Car04g01056 479 SMART PTPc_3 53 322 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 290 305 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 132 152 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 219 236 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 257 275 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 306 316 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 PRINTS Protein tyrosine phosphatase signature 114 121 IPR000242 GO:0004725|GO:0006470
Car04g01056 479 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 314 IPR029021 -
Car04g01056 479 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 242 314 IPR000387 GO:0016311|GO:0016791
Car04g01056 479 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 4 316 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01056 32 312 Protein tyrosine phosphatase (PTP) family AT1G71860 69.504 1.15e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01056 - - gmx:548044 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01056 04 10740479 10748115 Car04g01056 04 10740479 10748115 ECH