Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01054 ATGGAGCCTCTCTCTTCCACCAAACACaataataataacaataataataatCTCACTAAACCTTCTTCTCTCCATGTCGAGTCACCACCACTTGAACCAAGTCCTCTCCGTAAGATCATGGTGGTTGCCTCCATAGCCGCCGGTGTTCAATTCGGTTGGGCCTTACAACTCTCTCTTTTAACACCTTACGTCCAGTTGTTAGGTATCCCTCACACTTGGGCCGCTTACATTTGGCTTTGCGGCCCGATCTCTGGTATGCTTGTCCAGCCCATAGTCGGTTACCACAGCGACCGTTGCACTTCACGCTTCGGTCGCCGCCGTCCATTCATCGCTGCCGGTTCTTTCGCCGTCGCAATCGCCGTTTTCTTAATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGATAACTTAGCACAAAAAACTCGTCCCCGCGCCATCGCAATCTTCGTCGTCGGTTTCTGGATCCTCGACGTCGCTAATAACATGCTTCAAGGACCATGCCGTGCACTCCTCGCCGACCTCTGCGCCGGTAACCAACGGAAAACGAGGAACGCAAACGCGTTTTTCTCGTTTTTTATGGCTGTCGGTAACGTTCTTGGTTATGCCGCCGGTTCTTACAACGGACTCTATCACATGTTTCCGTTCACGAAGACGAAAGCGTGTGATGTTTACTGTGCGAATTTGAAGAGTTGTTTCTTCCTCTCAATCGCGCTTTTAACTATTTTAGCAACAGCGGCACTGATCTACGTTAAGGAAACTGCAATTAGTTCAGAGAAAACCGCGGCTGTTGTAGCGGAGGAAGACGGTGCTGGTTCACGCGGTGGCATGCCGTGTTTTGGGGAATTATCCGGTGCTTTTAAGGAACTAAAAAGGCCTATGTGGATCCTTTTATTGGTGACGTGTCTTAATTGGATTGCGTGGTTTCCTTTCTTGTTGTTTGATACGGATTGGATGGGTAAAGAGGTGTATGGAGGAACGGTTGGGGAAGGTCGTGCGTATGATATGGGCGTGCGCGCGGGTGCATTAGGACTCATGCTTAACTCTATCGTATTGGGTGCCACGTCATTGGGGGTTGATGTCATGGCGCGTTTCGTTGGGGGCGTGAAGAGGTTGTGGGGAATCGTTAACTTTTTGCTTGCGATTTGTTTGGCAATGACGGTTTTGGTTACTAAATTAGCTGAGCATTCGCGACAATACGCCGACGGTCAGCCTCTTCCACCTACCGGCGGTATCAAAGCCGGCGCGTTGGCTCTCTTTTCCGTCCTTGGAATTCCTCTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCTATTTTCTCCAGCACATCAGGGGCAGGCCAAGGTTTATCACTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGTTTGTGTCTGTTCTGAGTGGACCATGGGATGCTCTGTTTGGAGGTGGTAACTTGCCGGCATTCGTGGTGGGCGCGGTGGCGGCTCTAGCAAGTGGCATATTATCCATAATTTTACTTCCATCTCCACCACCAGATTTGGCCAAGTCTGTGTCAGCAACTGGAGGAGGCTTTCATTAA 1572 0.4981 MEPLSSTKHNNNNNNNNLTKPSSLHVESPPLEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSFAVAIAVFLIGYAADLGHMFGDNLAQKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLCAGNQRKTRNANAFFSFFMAVGNVLGYAAGSYNGLYHMFPFTKTKACDVYCANLKSCFFLSIALLTILATAALIYVKETAISSEKTAAVVAEEDGAGSRGGMPCFGELSGAFKELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGRAYDMGVRAGALGLMLNSIVLGATSLGVDVMARFVGGVKRLWGIVNFLLAICLAMTVLVTKLAEHSRQYADGQPLPPTGGIKAGALALFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSIILLPSPPPDLAKSVSATGGGFH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01054 523 MobiDBLite consensus disorder prediction 1 24 - -
Car04g01054 523 Gene3D MFS general substrate transporter like domains 31 515 IPR036259 -
Car04g01054 523 Pfam MFS/sugar transport protein 47 307 - -
Car04g01054 523 MobiDBLite consensus disorder prediction 1 30 - -
Car04g01054 523 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 28 514 - -
Car04g01054 523 TIGRFAM GPH_sucrose: sucrose/H+ symporter 35 509 IPR005989 GO:0005887|GO:0008515|GO:0015770
Car04g01054 523 SUPERFAMILY MFS general substrate transporter 38 508 IPR036259 -
Car04g01054 523 CDD MFS_SLC45_SUC 39 499 - -
Car04g01054 523 PANTHER SUGAR TRANSPORTER 28 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01054 Car-Chr4 10696210 10700476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01054 22 523 Sucrose Transporter Gene Family AT1G22710 69.352 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01054 K15378 - gmx:547679 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01054 04 10696210 10700476 Car04g01054 04 10696210 10700476 ECH
Car08g01098 08 10991250 10993617 Car04g01054 04 10696210 10700476 PCT