Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01048 atgccaacaacaacaacagaaacagcaacGGCAGCGTTTGGTGCTTTAGAAAATTCAAACGGAAACTCATCTAATAATCATGCCCCTCCCAAACATAGCTCCCGAGAATCACGTGAACTTCCTCCTTTACTTTCTTCTTCTTACCCAATCACTCTTAAGTTCATGGACGTGGGATACCGATTGAAGATAGAGAGCCAAAAAGCACAAGGAGGGTGCATCAAGAAATTATTTACAACGCTCGAATCATCACCGTCGGATCAAAGATCAACGGCAGGAGCAATACAAGAGCGAATCATTCTTAACGGGGTAACAGGTGTAGCCTATCCAGGAGAGATCCTAGCCATCCTGGGCCCATCTGGGAGCGGAAAATCGACGCTCCTAAACGCACTCGCAGGGAGACTTCATGGAAACGGCCTCACGGGAACAATCCTCGCTAACTCATCGAAACTCAACAGAACGATTCTCCGACGAACCGGTTTCGTAACTCAGGACGATATTCTCTACCCTCACCTAACGGTTCGTGAAACACTGATCTTCTGCTCCATGCTGCGCCTCCCGAGGGCACTTCCGCGCGAAGCGAAGGTGGCGGCGGCGGAGTCAGTAATCACAGAACTAGGTTTAAGCAAGTGCGAGAATACTATAATTGGCAACAGTTTCATCCGTGGCGTTTCCGGTGGAGAGAGGAAGCGCGTGAGTATTGCTCACGAGATGTTGGTGGACCCGGCGCTTTTGATCTTGGATGAGCCTACCTCTGGATTGGACTCAACGGCGGCGCATCGCCTTTTGTCGACGCTGGGATCGTTGGCGAGGAAGGGGAAGACGGTGGTGACGTCGTTGCACCAGCCGTCAAGTCGTGTATACCAGATGTTTGACAGAGTGATTGTGTTGTCAGAAGGTCAGTGCCTGTACTACGGCAAAGGAACCGACGCCATGCGATATTTTGAGTCGGTTGGATTCGCGCCATCCTTTCCGGTAAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTGGAAGGTGTAAGTGAAAAAGATAGACCAAACATAAAGCAAAATCTAGTTAATTCATATAACACAATATTGGGTCCAAAGGTAAAAGCTGCATGCATGGACACATCCAATGTTTCAACAACAAAAGATACTCACCCTTTGAGAACCAGCTCTTCAAAAGAACGTAGATATAGTGACAGAGTTAGCATCTTTGATTGGTTTTACCAATTCAGTATTCTTCTCCAAAGAAGCCTCAAAGAAAGAAAGTATGAATCTTTCAACACACTAAGAGTTTCTCAAGTTGTTGCTGCTGCACTACTAGCTGGTTTAATGTGGTGGCATTCAGACTATAAAAACATTCAAGATAGGCTTGGCTTACTCTTCTTCATTTCCATCTTTTGGGGTGTATTCCCATCTTTCAACTCTGTTTTCGCATTCCCTCAAGAACGTGTAATTTTTGTAAAAGAAAGGGCTTCTGGTATGTACACATTATCATCCTATTTCATGGCTAGAATTGTTGGAGACTTGCCAATGGAACTTATTCTTCCAACAGTTTTCCTCATCATTACATATTGGATGGGTGGATTGAAGCCTGATTTGTTGTCTTTTCTCTTGACACTGTTGGTTATTCTTGGAGTTGTGCTTGTTTCACAGGGCCTTGGCCTTGCTTTAGGTGCTGCAATAATGGATGCTAAACAAGCTTCCACTGTTGCAGCAGTGACAATGCTAGCATTTGTTTTAACAGGTGGATATTATGTCCATAAGGTACCATCTTGTGTGGCTTGGATCAAATATATATCCACAACATTCTACAGTTACAGGTTGCTAACAAGAATTCAATATGGTGATGGCAAGAAAATTGCATATCTATTGGGTTGCTATCATGGTAGTAGTACTCATGATGGGGCTAGCTGCAAATTTCTTGAAGAAGATGTTGTGGGTCAAATTGGTACAATGGGAAGCATTGGGGTGTTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCATTGAGACGCATCAAGAATTGA 2037 0.4394 MPTTTTETATAAFGALENSNGNSSNNHAPPKHSSRESRELPPLLSSSYPITLKFMDVGYRLKIESQKAQGGCIKKLFTTLESSPSDQRSTAGAIQERIILNGVTGVAYPGEILAILGPSGSGKSTLLNALAGRLHGNGLTGTILANSSKLNRTILRRTGFVTQDDILYPHLTVRETLIFCSMLRLPRALPREAKVAAAESVITELGLSKCENTIIGNSFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLLSTLGSLARKGKTVVTSLHQPSSRVYQMFDRVIVLSEGQCLYYGKGTDAMRYFESVGFAPSFPVNPADFLLDLANGVCHVEGVSEKDRPNIKQNLVNSYNTILGPKVKAACMDTSNVSTTKDTHPLRTSSSKERRYSDRVSIFDWFYQFSILLQRSLKERKYESFNTLRVSQVVAAALLAGLMWWHSDYKNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERVIFVKERASGMYTLSSYFMARIVGDLPMELILPTVFLIITYWMGGLKPDLLSFLLTLLVILGVVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCVAWIKYISTTFYSYRLLTRIQYGDGKKIAYLLGCYHGSSTHDGASCKFLEEDVVGQIGTMGSIGVLFFMFVFYRLLAYLALRRIKN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01048 678 Pfam ABC-2 type transporter 280 376 IPR043926 GO:0140359
Car04g01048 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 316 IPR027417 -
Car04g01048 678 MobiDBLite consensus disorder prediction 1 30 - -
Car04g01048 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 323 IPR003439 GO:0005524
Car04g01048 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 676 - -
Car04g01048 678 Pfam ABC-2 type transporter 408 613 IPR013525 GO:0016020|GO:0140359
Car04g01048 678 Pfam ABC transporter 101 251 IPR003439 GO:0005524
Car04g01048 678 MobiDBLite consensus disorder prediction 1 42 - -
Car04g01048 678 Gene3D - 89 317 IPR027417 -
Car04g01048 678 SMART AAA_5 109 300 IPR003593 -
Car04g01048 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 23 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01048 Car-Chr4 10640282 10648442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01048 99 299 Calmodulin-binding Proteins AT2G36910 29.756 7.63e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01048 K05681 - gmx:100812367 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01048 04 10640282 10648442 Car04g01048 04 10640282 10648442 ECH