Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01039 ATGGAGTCGTGTCTCAACTTCGCATCTTCCGCACCTTCTCGCCGCTCTGGGATGCTGAGGAAACACTTGAATTCCCCTCTTCTCACTATTGATTCTGCGCCACACTTCACCTCTTGCAAGGCTGATCTTACTGCTGCATCTTCAAGTATTCCATTGTCAAATATCAGATATTCTTGCGGATCTTTGCAAAGTGTTTCAAAAGCAAAATGGACCTCAAATCATTCTACCGACTATTGGGTACTGCGTTCTACAACGCAGATAGAAAATACAATCACAAGTAATGAAGATCGGAGTATGTGGGAAGCATGTAGGCAAGCACTTTCTACATTTAACTTCAGCGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGTCTTATTCATTCTCCTTATTGGGGAGAAGATCGTACTAAGGAAGTTCCCAAATTCGAGGCAGTAAATGCAACATTAGACTATCTAAGGAGTTTAAATCTTTCTGATGATGATCTATCCAAGTTGCTCAAAAAATTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAATTGAAAGCTAATACAAAGATCCTGAAGGAGCAATGGGGTATTGAAGGGAAATCTCTTAGGAACCTTCTCCTTCGAAATCCAAAAGTTTTGGGTTATAATATTGATTGTAAAGGAGATTGTATGGCACAATGCACTAGATGCTGGGTTCGATTCTAG 702 0.3989 MESCLNFASSAPSRRSGMLRKHLNSPLLTIDSAPHFTSCKADLTAASSSIPLSNIRYSCGSLQSVSKAKWTSNHSTDYWVLRSTTQIENTITSNEDRSMWEACRQALSTFNFSDEEKDKILGKAFGLIHSPYWGEDRTKEVPKFEAVNATLDYLRSLNLSDDDLSKLLKKFPEVLGCNLEEELKANTKILKEQWGIEGKSLRNLLLRNPKVLGYNIDCKGDCMAQCTRCWVRF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01039 233 PANTHER CGI-12 PROTEIN-RELATED 17 232 IPR003690 GO:0003690|GO:0006355
Car04g01039 233 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 232 - -
Car04g01039 233 Gene3D Transcription termination factor 3, mitochondrial 74 229 IPR038538 -
Car04g01039 233 Pfam mTERF 151 216 IPR003690 GO:0003690|GO:0006355
Car04g01039 233 SMART mt_12 165 197 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car04g01039 mTERF 5.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01039 - - gmx:100797265 331.257