Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01035 ATGTTCAGGTATGAATACACAACCACCACTTTCTTACTCTTGTTTTTGTTCTGTCCAATGGTTATGTCTTTGCTCTCTCGAAACCAAACAAAAACCATGATCAATCTCTCCAATCATCTTAATGTCTCTGATTGGAATACAAACAACAAAGACTCCAACCCATGTACATGGAATGGTGTCACCTGTGATATTTCAAATTCATCTGTCATCAAGATTGTTCTATCTGGTTCATCTCTCTCATCACAATCACTTCCTTTGCTTTGCAAAATTGAAACTTTGCAGGACATTGATGTCTCTAATAACCATCTCAGCTATATCCCAAATGAGTTCATTGATGCATGTGGAAATATTGAGAGTTTAAAGCTGTTAAATTTCAGTGGAAATGTGTTGACTGACTTTTTGCCTACTTTTCATGGTTTTGATGCATTGGAATCACTTGACATGTCGTTTAATGATTTAAAGGGTAGCATTTATTTGCAGTTAGATGAAATGGTTAGTCTAAAGTTTCTGAATCTTAGTAATAATAATTTCACTGGGAAACTTCCAACTAATTTGGGAAGTTCCATGGTTTTGGAGCAGCTTGTGCTTTCAAACAATGGTTTTGAAGGAACAATCCCTCATCAAATTTTGAGCTACAAAAATTTGACTGTGATTGATTTTATGGCAAATAATCTTTCCGGGTCTATTCCTTTCAATATTGGAAACCTTTCCAAGTTGGAAATTTTGAGTCTTTCCTCTAATAGGCTCAGTGGCGAAATCCCCATGTCACTCATGAATATCACCACTCTGGTAAGATTTGCAGCTAATCTAAACACCTTTACTGGTGCTGTTCCTCTTGGAAGTACAAAGTTTTTAAAGAATTTGGATCTTAGTTATAATAATTTATCTGAGTCCATTCCAGAAGGCCTTTTATCTCCATCACAGTTAGTGCTTGTAGATTTGTCTTATAACAAGTTACAAGGGCATGTACCTAAAAATATTTCTCCTAGTTTAGTAAGGTTGAGATTAGGGGGAAATTTGCTGACAGGAGAGGTTCCTTCGCTTAGTTGTGAAGCCGGTCACAATTTGACATACATGGAGCTGGAAAATAATCAGTTGACAGGTTTGATACCTCCTGGATTAGGTTCTTGCAGGAAATTAGCTTTGTTGAATTTAGCTGATAATGAATTGACTGGTGCACTGCCTTCAGAACTTGGTAATCTTAACAATCTTCAAGTTTTGAAGGTTCAAATGAACAAGCTTAATGGTACTATCCCAATTCAAATTTCACAACTAGTGAAGTTGTCTATTTTGAATTTGAGCAAGAATTCTCTTGATGGACCTATTCCATCTGATGTGTCAAGCATGGCAAACCTTACAGTCCTTGACTTGCAAGGTAACAGTCTCAACGGGTCTATACCGTCATCCATTGGAAACTTGGGAAAAATTCTAGAAATCCAACTTGGAGAAAACCAGCTAAGTGGTGCTATTCCACAAATGTCTTCGAGTCTACAAATTGCTTTGAATCTCAGTAGAAATCACTTTAGTGGAAATATTCCTACAAGTTTTGGTGATTTGGTTAACTTAGAGGTTTTGGATCTCTCAAATAACAACTtctctggtgaaattcctcagtctctgactagaatggcagcattgacacagctgcaactgtcaaacaatAAGCTATCAGGTGACCTTCCATTGTTCGGTTCGTATGTTAAAATTGATATAAGTGGAACCCATGTCACGAACAATAGTAATGTCTCACCCAACAATTCTCCAACAGAAGAAAAGAATGGGAAATCTGTCGTTGTAGCTGTTCTTATTGCAATTGCTGCTGCTATTTTTGTGGTAGGCCTTGTCACCCTGCTGGTTGTTACGATATCACGACACTATTGCAGTGTTAACGACCAACGCGTACAGTCAAGTGAAGGTGAAAATCTTGATCTTCCTCAAGTCATCAAGAGTAATCTGTTAACTCCAAATGGAATCCACAGATCAAACATTGACTTCTCCAAGGCCATGGAAGCTGTTGCCAAGACGTCCAACGTTACTTTGAAAACCAAGTTTTCAACTTACTATAAGGCCGTTATGCCATCTGGATCAATCTATTTTGCAAAGAAGCTGAACTGGTGTGACAAGATATTCCCGGTGAATAGTATTGATAAGTTTGGTAGAGAGCTAGAAGTATTGGCAAAGTTGAACAATTCAAATGTCATGGTTCCTCTAGCATATATTGTGTCCACTAACAATGCTTATATATTATACGAGTTTGTCTCGAATGGCTCGCTCTTTGACGCGCTTCATGGAAGCATGGAAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCAGTTGGTGTGGCTCAAGGTCTCTCTTTTCTGCATGGATTTGCCTCTGGTCCAATACTTCTACTTGATTTGTCAAGTAAAAGTATTATGCTGAAATCGCTAAAGGAGCCTCTAGTTGGTGACATTGAACACTACAAAGTGATTGATCCTTCAAAGAGTACTGGAAGTTTTTCTGCAGTTGCTGGTTCTGTTGGATACATTCCTCCAGAGTATGCATACACAATGAGAGTAACAATGGCAGGGAATATCTATAGCTTTGGGGTCATTCTACTGGAATTACTGACAGGCAAACCTGCAGTGACTGAGGGAACTGAATTGGTCAAGTGGGTTTCGCGCAATTCAAGAAATCAAGATTTCATTCTTGACTCTAATGTTAGTAGAACATCTCAGGCTGTTAGAAACCAAATGCTTGCAATTCTGGAGATTGCTCTTGTTTGTGTAAGCACATCGCCTGAAACAAGACCAAAGATGAAGACTGTGCTAAGGATGTTGCTTAATGCCAGATAA 2841 0.3728 MFRYEYTTTTFLLLFLFCPMVMSLLSRNQTKTMINLSNHLNVSDWNTNNKDSNPCTWNGVTCDISNSSVIKIVLSGSSLSSQSLPLLCKIETLQDIDVSNNHLSYIPNEFIDACGNIESLKLLNFSGNVLTDFLPTFHGFDALESLDMSFNDLKGSIYLQLDEMVSLKFLNLSNNNFTGKLPTNLGSSMVLEQLVLSNNGFEGTIPHQILSYKNLTVIDFMANNLSGSIPFNIGNLSKLEILSLSSNRLSGEIPMSLMNITTLVRFAANLNTFTGAVPLGSTKFLKNLDLSYNNLSESIPEGLLSPSQLVLVDLSYNKLQGHVPKNISPSLVRLRLGGNLLTGEVPSLSCEAGHNLTYMELENNQLTGLIPPGLGSCRKLALLNLADNELTGALPSELGNLNNLQVLKVQMNKLNGTIPIQISQLVKLSILNLSKNSLDGPIPSDVSSMANLTVLDLQGNSLNGSIPSSIGNLGKILEIQLGENQLSGAIPQMSSSLQIALNLSRNHFSGNIPTSFGDLVNLEVLDLSNNNFSGEIPQSLTRMAALTQLQLSNNKLSGDLPLFGSYVKIDISGTHVTNNSNVSPNNSPTEEKNGKSVVVAVLIAIAAAIFVVGLVTLLVVTISRHYCSVNDQRVQSSEGENLDLPQVIKSNLLTPNGIHRSNIDFSKAMEAVAKTSNVTLKTKFSTYYKAVMPSGSIYFAKKLNWCDKIFPVNSIDKFGRELEVLAKLNNSNVMVPLAYIVSTNNAYILYEFVSNGSLFDALHGSMENSLDWASRYSIAVGVAQGLSFLHGFASGPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNIYSFGVILLELLTGKPAVTEGTELVKWVSRNSRNQDFILDSNVSRTSQAVRNQMLAILEIALVCVSTSPETRPKMKTVLRMLLNAR 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01035 946 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Car04g01035 946 Gene3D Ribonuclease Inhibitor 279 590 IPR032675 -
Car04g01035 946 ProSiteProfiles Protein kinase domain profile. 673 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01035 946 Pfam Leucine rich repeat 501 556 IPR001611 GO:0005515
Car04g01035 946 PRINTS Leucine-rich repeat signature 285 298 - -
Car04g01035 946 PRINTS Leucine-rich repeat signature 519 532 - -
Car04g01035 946 PANTHER F12K21.25 10 943 - -
Car04g01035 946 Gene3D Transferase(Phosphotransferase) domain 1 753 946 - -
Car04g01035 946 SMART LRR_typ_2 117 139 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 90 113 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 519 543 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 279 306 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 449 473 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 236 259 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 401 425 IPR003591 -
Car04g01035 946 SMART LRR_typ_2 164 188 IPR003591 -
Car04g01035 946 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 943 - -
Car04g01035 946 Gene3D Phosphorylase Kinase; domain 1 654 752 - -
Car04g01035 946 Pfam Protein kinase domain 683 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01035 946 Gene3D Ribonuclease Inhibitor 189 270 IPR032675 -
Car04g01035 946 SUPERFAMILY Protein kinase-like (PK-like) 684 942 IPR011009 -
Car04g01035 946 Pfam Leucine Rich Repeat 166 185 IPR001611 GO:0005515
Car04g01035 946 Pfam Leucine Rich Repeat 451 473 IPR001611 GO:0005515
Car04g01035 946 SUPERFAMILY L domain-like 329 562 - -
Car04g01035 946 SUPERFAMILY L domain-like 35 324 - -
Car04g01035 946 Pfam Leucine rich repeat N-terminal domain 31 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01035 Car-Chr4 10506936 10510776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01035 32 946 Receptor kinase-like Gene Family AT2G41820 35.394 3.18e-152 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g01035 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01035 - - mtr:MTR_1g096260 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01035 04 10506936 10510776 Car04g01035 04 10506936 10510776 ECH