Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01030 ATGGAAGATTCAGAAGAAGATGAGCTTCTAAATCTTAGCCTTTCAGTTTCTTCCAATAAAGAAAGAAAAAAAAAGGGAAAAAACATCACAAATAATATTAGAAACTCCTATGAAGGCTATGAAGCAAAAATCTTTAGAGTTCTTCAAATGAGAGAACAAATGATAAGACAAGATCATAGAAGAAAAAGTGTTGTTAATGAAGATCATGAAAATGGTCTTCCATTAATTCACTTACTTCTAACAACAGCAACATTAGTTGACAACAACAACTTTGATTCATCTCTTACAAACCTAACAGATCTTTACAAAAATGTTTCCTTAACAGGTGATTCTGTTGAACGTGTTGTTGCTTATTTCACAGATGGTTTAACAGCAAAACTTCTGTCAAGAAAATCACCATTTTATGACATGGTTATGGAAGAACCAACCATTGATGAAGAGTTTCTTGCTTTCACTGATCTTTATAGAGTCTCACCTTACTTTCAATTTGCTCATTTCACTGCAAATCAAGCTATCTTAGAAGCTTTTGAAAAAGAAGAAGAAAAAAACAACCGTTCTATTCATGTTATTGATTTTGATGTTTCTTATGGATTTCAATGGCCTTCACTTATTCAATCACTCTCTGAAAAAGCAACAAGTGGAAACAGAATCTCACTAAGGTTAACATGTTTTGGTAAGAATCTTAAAGAGCTTCAAGAAACTGAAAGTAGGTTAGTTAGTTTCTCAAAGGGTTTTGGAAACCTAGTTTTTGAGTTTCAAGGGTTATTAAGAGGTTCTAGGGTTATTAACCTAAGGAAGAAGAAAAATGAAACTGTGGCAGTTAATTTAGTTTCTTATTTAAACACTTTGAGTTGTTTTATGAAAATATCTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCCATTGTTGTGTTGGTTGAACAAGAAGGTAGTAGAAACCCTAATAGAAACTTTTTGTCAAGATTCACAGATTCTTTGCATTATTTTGCAGCCATGTTTGATTCACTTGATGATTGTTTACCACTTGATAGTATTGAGAGGTTGAGGATTGAAAAGAAGGTTCTTGGAAAAGAGATTAAAAGCATGCTTAATTATGATGTGGAAGGTGGTTTTGAACTTGATTGTCACAAATATGAAAAAATGGAAACATGGAAAGCTAGAATGGAGAATCATGGATTTGTTGGTACTAAAATAAGCTCAAAAGCTATGATACAAGCTAAATTGTTACTTAAGATGAGGACACATTATTGTCCACTTCAATTTGAGGAAGAAGGTGGTGGTGGTTTCAGGGTTTCAGAAAGAGATGATGGAAGGGCTATTTCTTTAGGATGGCAAAATAGGTTTCTCATAACTGTCTCAGCTTGGCAatcactatga 1380 0.329 MEDSEEDELLNLSLSVSSNKERKKKGKNITNNIRNSYEGYEAKIFRVLQMREQMIRQDHRRKSVVNEDHENGLPLIHLLLTTATLVDNNNFDSSLTNLTDLYKNVSLTGDSVERVVAYFTDGLTAKLLSRKSPFYDMVMEEPTIDEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEKEEEKNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRLTCFGKNLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRNPNRNFLSRFTDSLHYFAAMFDSLDDCLPLDSIERLRIEKKVLGKEIKSMLNYDVEGGFELDCHKYEKMETWKARMENHGFVGTKISSKAMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDDGRAISLGWQNRFLITVSAWQSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01030 459 PANTHER OSJNBA0084A10.13 PROTEIN 8 457 - -
Car04g01030 459 ProSiteProfiles GRAS family profile. 66 457 IPR005202 -
Car04g01030 459 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 457 IPR005202 -
Car04g01030 459 Pfam GRAS domain family 75 457 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01030 Car-Chr4 10473819 10475198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01030 61 457 GRAS Transcription Factor Family AT1G14920 33.333 2.06e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car04g01030 GRAS 7.6e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01030 - - gmx:100809458 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01030 04 10473819 10475198 Car04g01030 04 10473819 10475198 ECH