Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01020 ATGGAACAACTCAAAGTGAAAACAACAACTTCTCCACCTTATCTACCAATCCCAATCCATGTTCCCATTCACACCATGTTCTCAAACTCACCTCCATCTTCATCTTCTTCACCTCCTTCACAATCTCCAACACCTTTCCCTTCACCACCTTCTCAATCTTCACCTCCTAACTTGGCTACTCCTCAACCACCATCTCCTCCACCACCAATTGTTGTTAGCCCTTGTGCTGCTTGCAAGATCCTGCGTCGCAGGTGTGTTGAAAAGTGTGTCTTAGCACCTTATTTTCCTCCTACTGATCCACTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCTAGTAACATCATCAAGTTCTTGCAGGAACTACCAGAACCTCAAAGAGCTGATGCTGTGAGCAGCATGGTTTATGAAGCAAATGCTAGAATAAGGGACCCAGTTTATGGATGTGCAGGTGCAATATGTCAACTCCAAAAACAAGTTAGTGAACTACAAACACAATTGGCCAAAGCACAAGCTGAGTTAGTTAACATGCATTGTCAACAAGCAAATTTAGTGGCACTAATTTGCATGGAAATGAGTCAATCACAACAAGACCATAATAATATGATTATTCAGCCACAACCTAATGTTGATATGAGTTGCTTCTTAGAGGATAataacagttttgggtctgcttgggagcctctttggacatga 696 0.3951 MEQLKVKTTTSPPYLPIPIHVPIHTMFSNSPPSSSSSPPSQSPTPFPSPPSQSSPPNLATPQPPSPPPPIVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSQSQQDHNNMIIQPQPNVDMSCFLEDNNSFGSAWEPLWT 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01020 231 Coils Coil 153 180 - -
Car04g01020 231 Pfam Lateral organ boundaries (LOB) domain 74 171 IPR004883 -
Car04g01020 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 63 228 - -
Car04g01020 231 MobiDBLite consensus disorder prediction 26 66 - -
Car04g01020 231 ProSiteProfiles LOB domain profile. 73 174 IPR004883 -
Car04g01020 231 MobiDBLite consensus disorder prediction 36 66 - -
Car04g01020 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 63 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01020 Car-Chr4 10332944 10334484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01020 70 231 AS2 family AT1G07900 68.485 1.02e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car04g01020 LOB 7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01020 - - gmx:100806667 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01020 04 10332944 10334484 Car04g01020 04 10332944 10334484 ECH