Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01016 ATGCAAAGAAAGATAAAGGAATCGCAAATGGGGAGGAAAGGAGGTTGGTTTTCTTCGGTGAAGAAAATTTTCATTTCTGATTCTAAAAAAGATCAGAAACAACATCATAAGTCAAAGTTAGGATGTTTTGGGCATCATCAACATTTTGAGGATGGTGAATGGGCATGTGGAGGAGGagcaccaattagtgttgtttctcatgttccatctcttcctccaagaaaagaTGTTAAACCAAATATTCATGAGGCAGATAATGATCAACAAAGCAAACAAGCTTTTTCATTGGCTTTAGCAACCGCTGTTGCTGCCGGAGCCGCCGTTGCTGCTTCTCAGGCTGCTCGCACAAGTTCTCCTCGTCGTTACCCTGGTAAAACAAATCAAGAAATTGCTGCTATCAAGATTCAAATCGCTTTCCGTGGATACTTGGCAAGGAGGACATTGCGTGGATTGAGAGGTTTGGCAAGGTTGAAAGCATTGGTAAAAGGACAATCTGTTCAAAGACAAGCAGCTACCACATTACAATGCATGCAAACTCTTTCAAGATTGCAGTCACAAGTTAGTGCAAGGAAGATCAGATTGTCTGAGGAGAATCAATCTTTTCAACGACAACTTCAGAGGAAACGTGAAAAGGAACTTGATAAATTACAAGCTGCTCCTAATGGAGAAAAATGGGATTATAGTTCACAATCAAAGGAGCAAATCCAAGCAAAATTGTTGAACAGACAAATTGCTGCTATGAGAAGAGAAAAGGCTTTGGCCTATGCATCAACACATCAGCAAACATGGAAGAACCCAAAATCAGCAAATGCAACATTTATGGATCCAAACAATCCTCATTGGGGCTGGAATTGGCTTGACAGATGGATGGCTTCAAGGCCATGGGAAGGACAAAACGCAAAAGATCAAAAGAATCATAAATCAGCAAAAGGTGCTGCAAGCCATACCATGTCAGTTGGTGAAATCTCCAAATTGTATGCTCTAAGAGATCAAAATCAAAATGGTAACAAAATTCCATCTCCACACCAAAAACCAAGTATTCCAAATCTAGCTTCAAAGGCCACACCTACAACACCTACAAAAGCTAAATCAAAAACATCTTCAAGTCCAAGAAGAGGTGGTTCTTGGGGTGGTGATATTGATATAAATACCACATTCAACAAAAGCTCCGGAAACAATCGACGACATAGCATTGCGGTGTCTCCGGTGAAAGAAGATGAAAGCCTTGCAAAGTCACCTTCACACACAAAGGCTTCAAATTCCAAATCCAAAATCCAAAGTTCATCATTTGGCATGCAGAAGAAAGGAGTTGTTGCTTCTACAAAAAAGCAACTTTCTCTTCCAGCTTCTCCATCTGGTTTAAGAAGGTATTCTATGGGAATGAGTTCTTCTAATAAGAATATTGCTACTGTCCCTCAAGAGAAAGTGAAAGTGAAAAATGGAGGGAGCAGGTAG 1455 0.3897 MQRKIKESQMGRKGGWFSSVKKIFISDSKKDQKQHHKSKLGCFGHHQHFEDGEWACGGGAPISVVSHVPSLPPRKDVKPNIHEADNDQQSKQAFSLALATAVAAGAAVAASQAARTSSPRRYPGKTNQEIAAIKIQIAFRGYLARRTLRGLRGLARLKALVKGQSVQRQAATTLQCMQTLSRLQSQVSARKIRLSEENQSFQRQLQRKREKELDKLQAAPNGEKWDYSSQSKEQIQAKLLNRQIAAMRREKALAYASTHQQTWKNPKSANATFMDPNNPHWGWNWLDRWMASRPWEGQNAKDQKNHKSAKGAASHTMSVGEISKLYALRDQNQNGNKIPSPHQKPSIPNLASKATPTTPTKAKSKTSSSPRRGGSWGGDIDINTTFNKSSGNNRRHSIAVSPVKEDESLAKSPSHTKASNSKSKIQSSSFGMQKKGVVASTKKQLSLPASPSGLRRYSMGMSSSNKNIATVPQEKVKVKNGGSR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01016 484 MobiDBLite consensus disorder prediction 332 373 - -
Car04g01016 484 MobiDBLite consensus disorder prediction 456 471 - -
Car04g01016 484 MobiDBLite consensus disorder prediction 332 484 - -
Car04g01016 484 MobiDBLite consensus disorder prediction 413 448 - -
Car04g01016 484 MobiDBLite consensus disorder prediction 380 397 - -
Car04g01016 484 Coils Coil 191 211 - -
Car04g01016 484 MobiDBLite consensus disorder prediction 297 317 - -
Car04g01016 484 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 10 477 - -
Car04g01016 484 PANTHER IQ-DOMAIN 5-RELATED 10 477 - -
Car04g01016 484 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Car04g01016 484 SMART iq_5 127 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01016 Car-Chr4 10303258 10306175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01016 10 458 IQD Protein Family AT5G03040 41.970 3.26e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01016 - - gmx:100807725 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01016 04 10303258 10306175 Car04g01016 04 10303258 10306175 ECH