Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01009 ATGCCGCCAGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGACAGGTCGGAATCGCTTGGCTCTGTGGCGAGATGGAGAGATTCGTCTCATCACCGTGATTTCAATCGATGGGGATCCGCCGAGTTTCGCAGACCACCTGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAACCGGGTCATGGTTATGGGGTTTCTCGGTCCGGCGACAAGTCGATGGAGGAAGATAGTCGACCATCGGTTTCACGGGGCGATGGAAAATATGGCAGGAGCAGTAGGGACAATAGAGGTTCCTTTGGCCAGAGAGATTGGAGAGGTCATTCGTGGGAAGTCACCAATGGCTCTCCAAATTTGTCCAGGAGGCCACCGGATATGAATAATGACCAGAGGTCAGTTGATGATTCCTTAACATATTCGTCTCATCCACATTCTGATTTTGTAAACACTTGGGAACAGCATCACTTGAAAGACCAGCATGAAAAGATGGGTGGTGTCAATGGGTTGGTAACAGGCCCAAGATGTGATAGAGAGAATTCTCTGGGTTCGATTGATTGGAAGCCACTTAAATGGACCCGATCTGGAAGCTTGTCTTCTCGAGGATCAGGTTTTAGCCACTCAAGTAGTTCAAGGAGTATGGCAGGGGCAGATTCCTATGAAGCAAAGCCTGATTTGCAACCCAAAAATGTCACTACCATTGAGTCGCATTCAGGGGAAGCCACTGCATGTGTGACATCTTCTATGCCGTTGGAAGATACAACTTCTAGAAAGAAGCCTAGGCTAAATTGGGGCGAGGGACTCGCAAAGTATGAGAAGAAAAAAGTCGAGGTACCTGATCCAGGTGCAAGCAAAGAAGATGGCCCGGTCAATATGGAACCCTGTAATTTAATCAGCCCCAACTTAGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGAGTGTGCATCTCCTGCAACTCCGTCTTCTGTTGCCTGCAGTTCCTCGCCAGGGGTGGATGATAAATTATCGGGAAAGACTGCAAATGCAGACAATAATGTTAGTAATTTGACTGAGTCACCTGCACCTGGGTTCCAGAATCACCTGCAGAGGTTTTATCTTAACCTTGAAAAATTGGATATTGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGATGATTCTGGTCTTGTTCGGTCCAATGCAATTAATAAGTTGCTTATATGGAAAGCTGACATTTCGAAGGTATTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTGAAGTCTCTAAAATCTTCTGTGGATAGATATCAGTGTCCTGTAGCATTGGGCTCCCAGCAGGAAGGTAGCAGTTTGAAATTTTATGAAGGTGTTGAAGTCTCTCAGAAGGTCATTCGGCCAGAACCATTGATAATTATCTCTTCTGATGAACCCAATATAGAGAAGATGCCTCAGTCAACTAATTTAATTGTTCATGAAAATGACAAGGAAGAGGATATTGATAGTCCGGGATCAGCAACTTCTAAATTTGTTGAGCCTCCGCCTTCGGTAAAAGCAGTTTCTTCATGTGATACTGGAGAGTGTTATAACTTATCAGGGGACATGGATACTATTCAACCTACTACCATAAAATGCCTAGTCCGCTGCACTACTAGGAAAGATGCTAGTGTATCTGCGTGTAATGATGTCAATACTTCTACAGAGATAAAGGATAGCTTGGATGATACTACCTTTGGAGCAAGCCTATGTTCTAGCTATGAGGATACTTATAATTCCATTATTGCCTCTAATAAAGAATCTGCCAACCGAGCGCACGATGTATTTGCTAAGTTATTGCCTAAAGAATGTAATAAGCTTGGTAACATGGGAGTCAGCAATGATTCGTCTTCTCATACATTAATTATGGAAAAATTTGCCAAGAAAAAACGGTTTGAAAGATTTAAGGAGAGAATTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTAATAGGAAATGCCGCCCAAAATCTCATAAGAAAAATGAACTAAGTGTACGAACTACCTGTAGCAGTAATCTGAAGAATCGATCTTCCATTCGTTCACGGTTTCCTTTCCCTGCTGGAAATCATCTAAGCTTGGTTCCAACGTCAGAGATTATTAATTTCACAGGCAAACTTCTTTCAGAATCACAAGCTCCACTGCAGAGAAACACTCTGAAGATGCCATCATTAATATTGGATGAGAAGGAGAAGATGGTTTCAAAATTCATATCTAGTAATGGACTGGTTGAAGATCCGTTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCAGAAGAGAGAGAAATTTTCTTGGAGAAATTTGCTGCATTTGGAAAAGATTTCTGTAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTTGAGTTCTACTACAAGAATCACAAATCTGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTTGGGAAGTCATTTGCAGCTAAATCTAACTTGATGGCATCAGGTAATAAAAGGATGCGAGCAGGAAGATTCCTTTTGGGGGGGTATGGTAATGTAAAAGCATCAAGGGGCGAGGACGTCAATATAGAGAGATCAAACAGTTTTGATATTCTTGCGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCACTCTCATCCGAGGCTATGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTAGATGGTAACAAGGAAAGGAACTTCTTGAAAGCGAAGCCTTTATACAAACAACCCTTGACGCCTGATTTTTCTCAGAATGCTGATGATGATTCTTGTTCAGATGAGAGCTGTGGTGAAGTGGATCTTTCTGACTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCGTCTTTTGGTAAGGATTTCGCAAAGATAGCACGGTGTGTAGGTACAAGGTCCCGAGAACATTGCAAAGTTTTCTTCAGCAAGACTCGGAAAGTCCTTGGACTGGATGTCGCACACCCCTTACCTGGAATTGTTGGATCCCCGCTGAATGATGACGCTAATGGTGGTGAGAGTGACACCGATGATGCATGTGTTGTTGAGACAGGCTCAGTGGTTGATGCTGATAAGTCTGGCAATAAAACAGATGAGGACCTGCCTTCTGGTGTCAATACACTCCATGACGAATCCAATCCTCTGGAAGCTAGGAATCTGTCAGCTGAGTTAAATGAATCAAGGGAAATAACCGGTACAGAAGTATGTCTTGAAAATGTAGGTGTGGATTCCAATGTTTTTGCAATTAAGGTTGAGTCTGGGCTGGGCTCTGATGGTAGTGGAGTGGTCTTGGGCAAATCTGACATGACTGGTTCAGTCAATGGACAATCAGCTATACTTACATCAGATAGCATAGAAGTTGCAAAAGGTGAAGCATATAAATTGGGAGATGCAATTAGAGAATCAATATCTACTCCAGGAATTATTGAACCATGGGAGTGTGGTTCTGTTGCTGTGGATAGACCTTTTTCTGATGTGTCTTCTGGAGATCTTGGAAATGAAGTGGAAAGGCAGAAAGTGATAGCACCCCAATGTGTTGATGACATAGATAATAAACATGAAGCTGATGAAGGTATTGTAGTTGAATTAAAAAGCTGTGTGTTAGAGTCAAGCACTGCTGCAAATGTTTCATTCTCATCTGTGGTCAATTCATGTTCAGGATTGAGTTTTGGTACTGAAAATAAGCCCGTGTCCCTTGGAAAGCCTCATATCCCTGCATTATCTACGAAGGATTCTCGGGCAACTGCTAATTCATTGTTGCAAAAAGCTGCTGCTGCTCAATGTGAAAAAACAGTTAGCCAGGATAGACTGTCCTCTACTTGTGATATTCAGGAAGGTAGAGATATGCGCTGTCATAGCTCTGGCAGCAATGGTGACCATCAGCTTCCTCTTCCGGGGAACCATGTTGGGACTGTTGGCATCCTCCAGGGCTATCCCTTGCGAGGGGCCATCAAGGAAGAAGTGGATGGAGTTATGAATTGCAGCAATTCAGCAACTGAGTTGCCTCTTCTGCCCCAAAAGGCCAAACAGACTGATGATCATTTTAAAACAACATGGCATTCTTCAGATTCAGACAAAACACCCAGAAATGGTGATGTGAAACTGTTTGGAAAGATACTGACCAATCCTTCTTCCACTCAGAAACCTAGTTTGATTTCAAAGGGAAGTGAAGAAAATGGTACCCATTACCCCAAGTTAAGCAACAAATCTTCTAATTTGAAATTTACTGGGCATCATAATTCTGATGGAAATTTGAAATTTTTGAAGTTTGACCGCAGTGATTATCTTGGACTTGAAAATGTTCCAGTGATGGGTTATGGTTATTGGGAAGGGAATGGAATTCAAACTATACAGACTGGTCTCTCATCATTGCCGGATTCTTCTTTTTTGCTAGCTAAATATCCTGCTGCCTTCAGTACTTATCCTTCTTCATCTTCTTCCAAATTGGAGCAACAACCATTGCAGGCATTTGCCAAGAATAATGAACGGCATTTGAGTGGTTCATCTGCTTTTACAGCTAGAGACATTAATGGCAGCAATGCCATGATTGATTATCAGATGTTTAGAAGTAGGGATGGTCCAAAAGTGCAGCCATTTATGGTGGATGTCAAACACTGCCAAAATGTATTCTCTGAGATGCAGAGACGAAACAGTTTTGAAGCAATCTCTAGTTTGCAGCAACAGGGAAGGGGAATGATGGGAATGAATAGCGTTGGAAGACCTGGGATTCTAGTGGGAGGAGGGTCATGCAGCGGCGTGTCGGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACATGTATGGTGGTCAGAATGGGAGTATTGTAAGAGATGATGAATCTTGGGGGGGGAAGGGGGATTTAGGCAGGTAG 5016 0.427 MPPEPLPWDRKDFFKERKHDRSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKSMEEDSRPSVSRGDGKYGRSSRDNRGSFGQRDWRGHSWEVTNGSPNLSRRPPDMNNDQRSVDDSLTYSSHPHSDFVNTWEQHHLKDQHEKMGGVNGLVTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMAGADSYEAKPDLQPKNVTTIESHSGEATACVTSSMPLEDTTSRKKPRLNWGEGLAKYEKKKVEVPDPGASKEDGPVNMEPCNLISPNLVDKSPKVTGFSECASPATPSSVACSSSPGVDDKLSGKTANADNNVSNLTESPAPGFQNHLQRFYLNLEKLDIDSLNNLGSSIVELVQSDDPSSDDSGLVRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSSVDRYQCPVALGSQQEGSSLKFYEGVEVSQKVIRPEPLIIISSDEPNIEKMPQSTNLIVHENDKEEDIDSPGSATSKFVEPPPSVKAVSSCDTGECYNLSGDMDTIQPTTIKCLVRCTTRKDASVSACNDVNTSTEIKDSLDDTTFGASLCSSYEDTYNSIIASNKESANRAHDVFAKLLPKECNKLGNMGVSNDSSSHTLIMEKFAKKKRFERFKERIIALKFKALHHLWKEDMRLLSNRKCRPKSHKKNELSVRTTCSSNLKNRSSIRSRFPFPAGNHLSLVPTSEIINFTGKLLSESQAPLQRNTLKMPSLILDEKEKMVSKFISSNGLVEDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFCKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSFAAKSNLMASGNKRMRAGRFLLGGYGNVKASRGEDVNIERSNSFDILADERETAAAADVLAGICGSLSSEAMSSCITSSVDPVDGNKERNFLKAKPLYKQPLTPDFSQNADDDSCSDESCGEVDLSDWTDDEKAAFLQAVSSFGKDFAKIARCVGTRSREHCKVFFSKTRKVLGLDVAHPLPGIVGSPLNDDANGGESDTDDACVVETGSVVDADKSGNKTDEDLPSGVNTLHDESNPLEARNLSAELNESREITGTEVCLENVGVDSNVFAIKVESGLGSDGSGVVLGKSDMTGSVNGQSAILTSDSIEVAKGEAYKLGDAIRESISTPGIIEPWECGSVAVDRPFSDVSSGDLGNEVERQKVIAPQCVDDIDNKHEADEGIVVELKSCVLESSTAANVSFSSVVNSCSGLSFGTENKPVSLGKPHIPALSTKDSRATANSLLQKAAAAQCEKTVSQDRLSSTCDIQEGRDMRCHSSGSNGDHQLPLPGNHVGTVGILQGYPLRGAIKEEVDGVMNCSNSATELPLLPQKAKQTDDHFKTTWHSSDSDKTPRNGDVKLFGKILTNPSSTQKPSLISKGSEENGTHYPKLSNKSSNLKFTGHHNSDGNLKFLKFDRSDYLGLENVPVMGYGYWEGNGIQTIQTGLSSLPDSSFLLAKYPAAFSTYPSSSSSKLEQQPLQAFAKNNERHLSGSSAFTARDINGSNAMIDYQMFRSRDGPKVQPFMVDVKHCQNVFSEMQRRNSFEAISSLQQQGRGMMGMNSVGRPGILVGGGSCSGVSDPVAAIKMHYSNSDMYGGQNGSIVRDDESWGGKGDLGR 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01009 1671 MobiDBLite consensus disorder prediction 116 154 - -
Car04g01009 1671 SUPERFAMILY Homeodomain-like 777 838 IPR009057 -
Car04g01009 1671 Pfam Myb-like DNA-binding domain 982 1022 IPR001005 -
Car04g01009 1671 MobiDBLite consensus disorder prediction 235 259 - -
Car04g01009 1671 Gene3D - 948 1034 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 1068 1090 - -
Car04g01009 1671 SUPERFAMILY Homeodomain-like 981 1028 IPR009057 -
Car04g01009 1671 SMART sant 790 838 IPR001005 -
Car04g01009 1671 SMART sant 979 1027 IPR001005 -
Car04g01009 1671 ProSiteProfiles SANT domain profile. 789 840 IPR017884 -
Car04g01009 1671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1644 - -
Car04g01009 1671 Gene3D - 770 842 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 8 45 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 1 270 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 155 169 - -
Car04g01009 1671 CDD SANT 983 1021 IPR001005 -
Car04g01009 1671 MobiDBLite consensus disorder prediction 326 349 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 199 222 - -
Car04g01009 1671 ProSiteProfiles SANT domain profile. 978 1029 IPR017884 -
Car04g01009 1671 MobiDBLite consensus disorder prediction 1424 1451 - -
Car04g01009 1671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1644 - -
Car04g01009 1671 Coils Coil 419 446 - -
Car04g01009 1671 MobiDBLite consensus disorder prediction 76 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01009 Car-Chr4 10250279 10259784 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car04g01009 Myb_DNA-binding 8.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01009 - - cam:101504689 3272.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01009 04 10250279 10259784 Car04g01009 04 10250279 10259784 ECH