Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00993 atgcattcaaacataatccagtttacatttaactcacttttaactaaaatcaatttttacaaatttaactcattcaaaataaaatttgtcactgctgagctaaacatacacTTAATGTTATGGTGTTTGGATGTAGGGTTATGCAGAGCCAGTCAAGTTGTTGATTTGTTCCAAACTGTGTCTCCTGAAATTACTGTCAGAGAGGCAAGATTAGAGGACTGTTGGGAAGTGGCAGAGACTCATTGCAGCTCTTTCTTTCCCGAATATTCCTTTCCATTAGATTTTGTGTTGAGAATGGATAGATTGGTGGCTATGTTAGCAGGATTCTCTTTACCAAATGGTTGCAAACGAACCTGTTTGGTTGCTGTTATTGGCAATTCCCTTGATCAAACTTTCTTATTTGGAAGTGAAGATTTTAAAATTGGGGGTTTTGATGGGAAATTAAGCCTCAACAAGGGATATGTGGCTGGCATATTAACAGTAGATACAGTTGCAGATTTTCTACCTAGAAAGGGGCCGTTGCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCAGAGAAAAATTTAGACAGAAAGGAATAGCCAAACAATTGGTGGCTAAGGCAGAATCACAAGCCAGAAGTTGGGGATGTCGTGCCATCGCGTTACACTGCGATTTACGAAATCCCGCAGCGACTAAGTTATACCAAGGCCAAGGTTTCAAATCTATAAAGGTTCCAGAAGGAGCTAACTGGCCTCAACCAAAGACCTCACCAGATGTTATTACACGTGCAAGTGGTTGGTGGTTGAAGGAGTTTGGCACAATACATCCATCATCCACTACCTCAGTTTCTCCGCTGTGGCAATTCAAGCGCTCTGCAACTTCTTTTCATCATCACATGGCAGTAACATCAGGGAAGATTGTCCAAAATGTTTTTGTGTCACACTGCTGCCAACAGAATAGACAGTCTAGTCGAAGGGACTATTGTGCCCCTTATACGCGCAACTTGCTTCCCTCTACTCCAGGGAAGTTGACATGGACTGCCATCTCTTCCATGCAATTGCGCACGTTATCGATACCTCAGAACGATTTTACTAACCGGAGAAATATTCTCTGCAATGCTTCTGCATCTTCTACTGTAGTGCCATTTCTAGAGAAGACTTACTTTTTAAGGCTTCAAAATGGCAGTGACATACGTGGTGTGGCTGTTGATGGTGTTGAGGGAGAGGGAGTTAACCTCACCGAGCCTGTTGCTGAAGCAATAGGAGCTGCTTTCGCTGCATGGTTAGCGGATAAAAAGCAAGCAGATGCTTCTCGGCATTTGAGAGTTTCTATTGGCCATGATTCCCGGATATCAGCTAAATTACTACAGAATGCGATTTCTCGAGGTCTTGCTGGTGCTGGCCTAGAAGTTGTCCTATATGGATTAGCATCAACACCAGCCATGTTTAATAGCACACTCACAAAGGATGAAGCATTTTTGTGTCCTGTTGATGGGTCTATAATGATAACAGCCAGTCATCTGCCTTTCAACAGGAATGGATTCAAATTTTTCACAAATGCCGGCGGTCTTGGGAAGGCTGACATCAAAGATATCTTAGAGCGAGCTGCAAACATATACAATCAATTTACAGCAGAAAGTTTGACGAATTCTGAGAGAAAGGATTCATTATCGATTAAGACAGTCGATTACATGTCTGTGTATACATCTGATCTAGTAAAAGCAGTTCGCAAAGCAGCTGGTAACATAGAGAAACCATTGGAGGGTTTCCATATAGTTGTTGATGCAGGCAATGGAGCAGGTGGATTTTTTGCAGCAAAGGTGCTGGAACCTCTTGGCGCAATAACTTCTGGCAGTCAATTTTTGGAGCCTGATGGCTTGTTTCCAAACCATATCCCCAATCCCGAGGACAAAACAGCAATGAAAGCTATAACCAAGGCAGTCCTTGATAACAAAGCTGATCTTGGAATTATCTTTGACACTGACGTGGATAGATCTGCTGCTGTGGATTCCACTGGACGTGAATTCAACCGGAATCGTTTAATTGCCTTAATGGCAGCTATCGTTCTTGAGGAACATCCAGGAACAACTATTGTCACAGACAGTGTGACTTCTGATGGCCTTACCACATTTATTGAAAAGAAACTTGGTGGAAAACACCATCGGTTCAAAAGAGGCTACAAAAATGTGATTGATGAAGCTGTCCGTTTGAACTCTATCGGTGAGGAGTCACATCTGGCAATTGAAACCAGTGGACATGGAGCTCTTAAAGAGAATAATTGGCTTGATGACGGTGCATACCTAATGGTCAAGATCTTAAATAAACTTGCTTCTGCTAGAGCTTCGGGCGTGGGTGGTGGAAGCAATGTTTTGACTGGTCTAATAGACGGACTCCAGGAACCAGCTTTTTCTGCAGAACTCAGATTAAAGATAGACCAAAACCATTCAGATCTTAAAGGAGGATCTTTCCGGGAATATGGAGAAAATGTGCTGAAACATTTGGAAAACTCTATTGGCTCTGATCCAAACCTGCAAAAGGCTCCTGTAAACTACGAGGGGGTCAGAGTTTCTGGCTATGGTGGTTGGTTCCTTCTTAGACTATCGCTCCATGATCCTGTACTTCCCCTTAACATTGAGGCACCTAATAATGAAGATGCTTTGAAGCTTGGACTTACTGTGCTTGCAGCTGTAAAGGAGTTTGCAGGTTTAGACACATCAGCGTTGAACAAATTTGTAGAATCATAA 2739 0.4126 MHSNIIQFTFNSLLTKINFYKFNSFKIKFVTAELNIHLMLWCLDVGLCRASQVVDLFQTVSPEITVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSLPNGCKRTCLVAVIGNSLDQTFLFGSEDFKIGGFDGKLSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRQKGIAKQLVAKAESQARSWGCRAIALHCDLRNPAATKLYQGQGFKSIKVPEGANWPQPKTSPDVITRASGWWLKEFGTIHPSSTTSVSPLWQFKRSATSFHHHMAVTSGKIVQNVFVSHCCQQNRQSSRRDYCAPYTRNLLPSTPGKLTWTAISSMQLRTLSIPQNDFTNRRNILCNASASSTVVPFLEKTYFLRLQNGSDIRGVAVDGVEGEGVNLTEPVAEAIGAAFAAWLADKKQADASRHLRVSIGHDSRISAKLLQNAISRGLAGAGLEVVLYGLASTPAMFNSTLTKDEAFLCPVDGSIMITASHLPFNRNGFKFFTNAGGLGKADIKDILERAANIYNQFTAESLTNSERKDSLSIKTVDYMSVYTSDLVKAVRKAAGNIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGAITSGSQFLEPDGLFPNHIPNPEDKTAMKAITKAVLDNKADLGIIFDTDVDRSAAVDSTGREFNRNRLIALMAAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAVRLNSIGEESHLAIETSGHGALKENNWLDDGAYLMVKILNKLASARASGVGGGSNVLTGLIDGLQEPAFSAELRLKIDQNHSDLKGGSFREYGENVLKHLENSIGSDPNLQKAPVNYEGVRVSGYGGWFLLRLSLHDPVLPLNIEAPNNEDALKLGLTVLAAVKEFAGLDTSALNKFVES 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00993 912 PANTHER PHOSPHOHEXOSE MUTASE 386 910 - -
Car04g00993 912 CDD NAT_SF 180 221 - -
Car04g00993 912 Gene3D - 822 901 - -
Car04g00993 912 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 390 538 IPR005844 GO:0005975|GO:0016868
Car04g00993 912 Pfam Acetyltransferase (GNAT) family 156 238 IPR000182 GO:0016407
Car04g00993 912 SUPERFAMILY Phosphoglucomutase, C-terminal domain 848 898 IPR036900 GO:0016868|GO:0071704
Car04g00993 912 Gene3D - 391 548 - -
Car04g00993 912 SUPERFAMILY Phosphoglucomutase, first 3 domains 570 672 IPR016055 GO:0005975|GO:0016868
Car04g00993 912 SUPERFAMILY Phosphoglucomutase, first 3 domains 676 775 IPR016055 GO:0005975|GO:0016868
Car04g00993 912 Gene3D - 668 781 - -
Car04g00993 912 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 566 671 IPR005845 GO:0005975
Car04g00993 912 PANTHER PHOSPHOGLUCOSAMINE MUTASE FAMILY PROTEIN 386 910 - -
Car04g00993 912 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 676 777 IPR005846 GO:0005975|GO:0016868
Car04g00993 912 PRINTS Phosphoglucomutase/phosphomannomutase family signature 587 606 IPR005841 GO:0005975|GO:0016868
Car04g00993 912 PRINTS Phosphoglucomutase/phosphomannomutase family signature 622 635 IPR005841 GO:0005975|GO:0016868
Car04g00993 912 PRINTS Phosphoglucomutase/phosphomannomutase family signature 497 511 IPR005841 GO:0005975|GO:0016868
Car04g00993 912 PRINTS Phosphoglucomutase/phosphomannomutase family signature 651 666 IPR005841 GO:0005975|GO:0016868
Car04g00993 912 Gene3D - 589 665 - -
Car04g00993 912 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 64 258 IPR000182 GO:0016407
Car04g00993 912 CDD PMM_PGM 390 887 - -
Car04g00993 912 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 245 IPR016181 -
Car04g00993 912 SUPERFAMILY Phosphoglucomutase, first 3 domains 394 574 IPR016055 GO:0005975|GO:0016868
Car04g00993 912 Gene3D - 61 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00993 Car-Chr4 10020763 10031419 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Car04g00993 PGM_PMM_I 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00993 - - gmx:100816228 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00993 04 10020763 10031419 Car04g00993 04 10020763 10031419 ECH